RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CFAP58Q5T655 872 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 PPP1R26Q5T8A7 1209 aaPredicted RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 FAM102AQ5T9C2 384 aaPredicted RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 DUPD1Q68J44 220 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 SCARA3Q6AZY7 606 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 DCLRE1AQ6PJP8 1040 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 CCDC137Q6PK04 289 aaKnown RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 GLB1LQ6UWU2 654 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 AGMOQ6ZNB7 445 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 SLC24A5Q71RS6 500 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 SLC26A9Q7LBE3 791 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 ACOT1Q86TX2 421 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 JAMLQ86YT9 394 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 PSTKQ8IV42 348 aaKnown RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 CCDC105Q8IYK2 499 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 CCDC89Q8N998 374 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 B3GALNT2Q8NCR0 500 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 FAM71BQ8TC56 605 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 URGCPQ8TCY9 931 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 HDAC7Q8WUI4 952 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 KBTBD7Q8WVZ9 684 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 TEKT4Q8WW24 435 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 KCTD13Q8WZ19 329 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 APBB2Q92870 758 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 RUFY1Q96T51 708 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 GAD1Q99259 594 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 BEGAINQ9BUH8 593 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 TRIM62Q9BVG3 475 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 AGO3Q9H9G7 860 aaKnown RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 MTRF1LQ9UGC7 380 aaKnown RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 HMGXB4Q9UGU5 601 aa10.72□□□□□ -0.69
MSH5-213ENST00000468136 DRG1Q9Y295 367 aaKnown RBP10.72□□□□□ -0.69
MSH5-213ENST00000468136 A0A1W2PQ45 241 aaPredicted RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 A0A1W2PQY0 241 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 C2CD4BA6NLJ0 364 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 TMEM189-UBE2V1I3L0A0 370 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 PITPNM1O00562 1244 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 HOXA2O43364 376 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 HSF2BPO75031 334 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 RARAP10276 462 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 CKBP12277 381 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 SELPP16109 830 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 TYMPP19971 482 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 SDC4P31431 198 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 RFC1P35251 1148 aaPredicted RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 HSPA9P38646 679 aaKnown RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 MLH1P40692 756 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 PTPN9P43378 593 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 MARCKSL1P49006 195 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 SOX4Q06945 474 aaPredicted RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 CALCOCO2Q13137 446 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 HLTFQ14527 1009 aaKnown RBP eCLIP10.71□□□□□ -0.69
MSH5-213ENST00000468136 PDK2Q15119 407 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 SIX1Q15475 284 aaPredicted RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 PTPROQ16827 1216 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 ZFYVE27Q5T4F4 411 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 CYP4A22Q5TCH4 519 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 OR6B2Q6IFH4 312 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 DSTYKQ6XUX3 929 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 SND1Q7KZF4 910 aaKnown RBP eCLIP10.71□□□□□ -0.69
MSH5-213ENST00000468136 ZNF598Q86UK7 904 aaKnown RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 ECHDC2Q86YB7 292 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 GSTCDQ8NEC7 633 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 CMASQ8NFW8 434 aaPredicted RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 ZNF296Q8WUU4 475 aaPredicted RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 CASKIN2Q8WXE0 1202 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 IFT81Q8WYA0 676 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 WNT8BQ93098 351 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 SENP8Q96LD8 212 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 ADAM2Q99965 735 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 DUSP16Q9BY84 665 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 TRIM7Q9C029 511 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.71□□□□□ -0.69
MSH5-213ENST00000468136 ST7Q9NRC1 585 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 METTL5Q9NRN9 209 aaKnown RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 RRN3Q9NYV6 651 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 WHRNQ9P202 907 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 CHORDC1Q9UHD1 332 aaPredicted RBP10.71□□□□□ -0.69
MSH5-213ENST00000468136 CYTH4Q9UIA0 394 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 USTQ9Y2C2 406 aa10.71□□□□□ -0.69
MSH5-213ENST00000468136 CARNS1A5YM72 827 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 GOLGA6BA6NDN3 693 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 A6NNZ2 444 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 E5RJQ4 531 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 GOLGA8SH3BPF8 625 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 M0QZQ0 153 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 SMAPO00193 183 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 PPEF2O14830 753 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 SPTLC1O15269 473 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 TTI1O43156 1089 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 TRAPPC3O43617 180 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 PRPSAP2O60256 369 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 LRCH4O75427 683 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 SASH3O75995 380 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 KRT1P04264 644 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 PFKMP08237 780 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 PDGFRAP16234 1089 aa10.7□□□□□ -0.7
MSH5-213ENST00000468136 NPR3P17342 541 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms