RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ANXA13P27216 316 aa20.37■□□□□ 0.85
COL7A1-207ENST00000467985 CASP4P49662 377 aa20.37■□□□□ 0.85
COL7A1-207ENST00000467985 ZNF268Q14587 947 aaPredicted RBP20.37■□□□□ 0.85
COL7A1-207ENST00000467985 KCNB1Q14721 858 aa20.37■□□□□ 0.85
COL7A1-207ENST00000467985 CCDC142Q17RM4 750 aa20.37■□□□□ 0.85
COL7A1-207ENST00000467985 TDRD10Q5VZ19 366 aaKnown RBP20.37■□□□□ 0.85
COL7A1-207ENST00000467985 TXNDC8Q6A555 127 aa20.37■□□□□ 0.85
COL7A1-207ENST00000467985 MAMSTRQ6ZN01 415 aa20.37■□□□□ 0.85
COL7A1-207ENST00000467985 RALGPS2Q86X27 583 aaPredicted RBP20.37■□□□□ 0.85
COL7A1-207ENST00000467985 MAML2Q8IZL2 1156 aaPredicted RBP20.37■□□□□ 0.85
COL7A1-207ENST00000467985 PLEKHO2Q8TD55 490 aa20.37■□□□□ 0.85
COL7A1-207ENST00000467985 TMC2Q8TDI7 906 aa20.37■□□□□ 0.85
COL7A1-207ENST00000467985 NXF1Q9UBU9 619 aaKnown RBP20.37■□□□□ 0.85
COL7A1-207ENST00000467985 SPTBN4Q9H254 2564 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 IKBKBO14920 756 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 MAPK13O15264 365 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 P4HA1P13674 534 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 BDNFP23560 247 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 CCNE1P24864 410 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 GRIK1P39086 918 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 NUCB2P80303 420 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 NCOA4Q13772 614 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 NFIL3Q16649 462 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 ZNF699Q32M78 642 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 ZNF667Q5HYK9 610 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 PCED1BQ96HM7 432 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 CHRDQ9H2X0 955 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 GOLPH3LQ9H4A5 285 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 OBSL1O75147 1896 aa20.36■□□□□ 0.85
COL7A1-207ENST00000467985 A8MXQ7 604 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 CLSTN1O94985 981 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 C4BPAP04003 597 aaKnown RBP20.35■□□□□ 0.85
COL7A1-207ENST00000467985 PRR29P0C7W0 189 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 PTPN1P18031 435 aaKnown RBP20.35■□□□□ 0.85
COL7A1-207ENST00000467985 RPL13P26373 211 aaKnown RBP20.35■□□□□ 0.85
COL7A1-207ENST00000467985 PDE6CP51160 858 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 CSTF1Q05048 431 aaKnown RBP20.35■□□□□ 0.85
COL7A1-207ENST00000467985 LRRC32Q14392 662 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 PPP2R5DQ14738 602 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 ITPRIPL2Q3MIP1 535 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 MDH1BQ5I0G3 518 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 CEP135Q66GS9 1140 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 GUF1Q8N442 669 aaKnown RBP20.35■□□□□ 0.85
COL7A1-207ENST00000467985 STKLD1Q8NE28 680 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 TAF4BQ92750 862 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 USP13Q92995 863 aaPredicted RBP20.35■□□□□ 0.85
COL7A1-207ENST00000467985 ZFYVE19Q96K21 471 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 C8orf48Q96LL4 319 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 ELOVL4Q9GZR5 314 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 SMG9Q9H0W8 520 aaKnown RBP20.35■□□□□ 0.85
COL7A1-207ENST00000467985 LMAN1LQ9HAT1 526 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 R4GN57 208 aa20.35■□□□□ 0.85
COL7A1-207ENST00000467985 ZNF638Q14966 1978 aaKnown RBP20.35■□□□□ 0.85
COL7A1-207ENST00000467985 EP300Q09472 2414 aaPredicted RBP20.34■□□□□ 0.85
COL7A1-207ENST00000467985 PTPRDP23468 1912 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 TRAV19A0A0A6YYK7 116 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 GOLGA6L4A6NEF3 574 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 SPECC1L-ADORA2AF8WAN1 911 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 LMNAP02545 664 aaKnown RBP20.34■□□□□ 0.85
COL7A1-207ENST00000467985 USP17L7P0C7H9 530 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 CTHP32929 405 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 MTAPQ13126 283 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 SGSM1Q2NKQ1 1148 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 ZACNQ401N2 412 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 CC2D1AQ6P1N0 951 aaPredicted RBP20.34■□□□□ 0.85
COL7A1-207ENST00000467985 DENND5BQ6ZUT9 1274 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 B3GALNT2Q8NCR0 500 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 FAM126AQ9BYI3 521 aaPredicted RBP20.34■□□□□ 0.85
COL7A1-207ENST00000467985 GDPD2Q9HCC8 539 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 PRMT8Q9NR22 394 aaPredicted RBP20.34■□□□□ 0.85
COL7A1-207ENST00000467985 GTSE1Q9NYZ3 720 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 PCDHGA2Q9Y5H1 932 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 FANCMQ8IYD8 2048 aa20.34■□□□□ 0.85
COL7A1-207ENST00000467985 ATP8B3O60423 1300 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 KIF26AQ9ULI4 1882 aaPredicted RBP20.33■□□□□ 0.85
COL7A1-207ENST00000467985 TADA3O75528 432 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 CKMP06732 381 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 PFKLP17858 780 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 NR2F2P24468 414 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 PPP3CCP48454 512 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 NOP14P78316 857 aaKnown RBP20.33■□□□□ 0.85
COL7A1-207ENST00000467985 ENPEPQ07075 957 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 DGKKQ5KSL6 1271 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 INTS8Q75QN2 995 aaKnown RBP20.33■□□□□ 0.85
COL7A1-207ENST00000467985 TNIP3Q96KP6 325 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 FAM83CQ9BQN1 747 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 TRPC7Q9HCX4 862 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 GKN1Q9NS71 199 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 CIZ1Q9ULV3 898 aaPredicted RBP20.33■□□□□ 0.85
COL7A1-207ENST00000467985 CCL26Q9Y258 94 aa20.33■□□□□ 0.85
COL7A1-207ENST00000467985 GREB1Q4ZG55 1949 aa20.33■□□□□ 0.84
COL7A1-207ENST00000467985 KINO60870 393 aaKnown RBP20.32■□□□□ 0.84
COL7A1-207ENST00000467985 VNN1O95497 513 aa20.32■□□□□ 0.84
COL7A1-207ENST00000467985 CHRNB1P11230 501 aa20.32■□□□□ 0.84
COL7A1-207ENST00000467985 SOX9P48436 509 aa20.32■□□□□ 0.84
COL7A1-207ENST00000467985 CCR3P51677 355 aa20.32■□□□□ 0.84
COL7A1-207ENST00000467985 VAMP7P51809 220 aa20.32■□□□□ 0.84
COL7A1-207ENST00000467985 DLG4P78352 724 aa20.32■□□□□ 0.84
COL7A1-207ENST00000467985 AMPD2Q01433 879 aa20.32■□□□□ 0.84
COL7A1-207ENST00000467985 FAM160A1Q05DH4 1040 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms