RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 TTC9BQ8N6N2 239 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 TRIML1Q8N9V2 468 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 BEST2Q8NFU1 509 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 RHBDD1Q8TEB9 315 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 WHAMMQ8TF30 809 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 HMGB4Q8WW32 186 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 TCP11Q8WWU5 503 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 TTC9Q92623 222 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 MED8Q96G25 268 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 SPACA7Q96KW9 195 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 CDC6Q99741 560 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 PI4K2AQ9BTU6 479 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 SAP130Q9H0E3 1048 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 GLT8D2Q9H1C3 349 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 LINC00597Q9H2U6 94 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 IL21Q9HBE4 155 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 CPNE5Q9HCH3 593 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 XPNPEP1Q9NQW7 623 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 BTBD3Q9Y2F9 522 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 GDAQ9Y2T3 454 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 MYH6P13533 1939 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 WDR81Q562E7 1941 aa4.65□□□□□ -1.67
CPS1-205ENST00000467353 SMIM28A0A1B0GU29 152 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 A0A1W2PQD8 194 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 SERTM1A2A2V5 107 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 ENO4A6NNW6 628 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 SH2B2O14492 632 aaPredicted RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 TERTO14746 1132 aaKnown RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 SYN3O14994 580 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 ADAM23O75077 832 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 KLF8O95600 359 aaPredicted RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 FGF19O95750 216 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 GLRA2P23416 452 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 ARL2P36404 184 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 OPRD1P41143 372 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 ALDH1A3P47895 512 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 QARSP47897 775 aaKnown RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 CDR1P51861 262 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 SMTNP53814 917 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 EPHA4P54764 986 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 WNT7BP56706 349 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 BNC1Q01954 994 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 MESP2Q0VG99 397 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 GRIK2Q13002 908 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 BYSLQ13895 437 aaKnown RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 UBAP2LQ14157 1087 aaKnown RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 TFDP1Q14186 410 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 MXD4Q14582 209 aaPredicted RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 RTP5Q14D33 572 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 PDGFRLQ15198 375 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 TLR1Q15399 786 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 RTN1Q16799 776 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 ARHGAP15Q53QZ3 475 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 ARHGAP40Q5TG30 622 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 LMBRD2Q68DH5 695 aaPredicted RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 HIST2H2BCQ6DN03 193 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 CENPPQ6IPU0 288 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 CC2D1AQ6P1N0 951 aaPredicted RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 ZNF574Q6ZN55 896 aaPredicted RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 RABEPKQ7Z6M1 372 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 TMEM150AQ86TG1 271 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 TMPRSS12Q86WS5 348 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 EXOC8Q8IYI6 725 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 PGBD3Q8N328 593 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 TMTC2Q8N394 836 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 MAB21L3Q8N8X9 362 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 IL17RCQ8NAC3 791 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 TXNDC5Q8NBS9 432 aaKnown RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 ATAD1Q8NBU5 361 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 EHBP1Q8NDI1 1231 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 SNIP1Q8TAD8 396 aaKnown RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 EDEM1Q92611 657 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 FGF11Q92914 225 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 PSMG2Q969U7 264 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 NXPE2Q96DL1 559 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 ZNF419Q96HQ0 510 aaPredicted RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 HSPA12BQ96MM6 686 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 UROC1Q96N76 676 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 MTRQ99707 1265 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 LPIN3Q9BQK8 851 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 PDZD7Q9H5P4 517 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 GAREM1Q9H706 876 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 ETNK1Q9HBU6 452 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 ZDHHC4Q9NPG8 344 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 TM7SF3Q9NS93 570 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 TDP1Q9NUW8 608 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 PGPEP1Q9NXJ5 209 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 HSPBP1Q9NZL4 362 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 BCCIPQ9P287 314 aaKnown RBP eCLIP4.64□□□□□ -1.67
CPS1-205ENST00000467353 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.64□□□□□ -1.67
CPS1-205ENST00000467353 FNDC3AQ9Y2H6 1198 aaKnown RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 ASB3Q9Y575 518 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 SLC12A7Q9Y666 1083 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 COL5A1P20908 1838 aaPredicted RBP4.64□□□□□ -1.67
CPS1-205ENST00000467353 CNTNAP5Q8WYK1 1306 aa4.64□□□□□ -1.67
CPS1-205ENST00000467353 PTPRQQ9UMZ3 2332 aa4.63□□□□□ -1.67
CPS1-205ENST00000467353 SPTAN1Q13813 2472 aaKnown RBP4.63□□□□□ -1.67
CPS1-205ENST00000467353 SPAG17Q6Q759 2223 aa4.63□□□□□ -1.67
CPS1-205ENST00000467353 IGHV1OR15-9A0A0B4J2B8 117 aa4.63□□□□□ -1.67
CPS1-205ENST00000467353 TCRBV21S2A2A0A5A6 115 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms