RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 DDX20Q9UHI6 824 aaKnown RBP4.63□□□□□ -1.67
VPS50-209ENST00000467326 ST3GAL5Q9UNP4 418 aa4.63□□□□□ -1.67
VPS50-209ENST00000467326 PAXBP1Q9Y5B6 917 aa4.63□□□□□ -1.67
VPS50-209ENST00000467326 CFAP69A5D8W1 941 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 A6NNZ2 444 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 SLC16A3O15427 465 aaKnown RBP4.62□□□□□ -1.67
VPS50-209ENST00000467326 FRS3O43559 492 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 WT1P19544 449 aaPredicted RBP4.62□□□□□ -1.67
VPS50-209ENST00000467326 DRD4P21917 467 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 LRPAP1P30533 357 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 CACNB3P54284 484 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 E2F2Q14209 437 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 GFOD2Q3B7J2 385 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 MGAT5BQ3V5L5 792 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 SYCE2Q6PIF2 218 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 APOA5Q6Q788 366 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 ZNF551Q7Z340 670 aaPredicted RBP4.62□□□□□ -1.67
VPS50-209ENST00000467326 MAVSQ7Z434 540 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 DTX2Q86UW9 622 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 ATG4AQ8WYN0 398 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 HAPLN3Q96S86 360 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 MS4A7Q9GZW8 240 aaPredicted RBP4.62□□□□□ -1.67
VPS50-209ENST00000467326 CXorf36Q9H7Y0 433 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 TERF2IPQ9NYB0 399 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 NDRG4Q9ULP0 352 aaKnown RBP4.62□□□□□ -1.67
VPS50-209ENST00000467326 L1RE1Q9UN81 338 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 SSX2IPQ9Y2D8 614 aa4.62□□□□□ -1.67
VPS50-209ENST00000467326 LRRC3CA6NJW4 275 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 MYO1FO00160 1098 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 MASP2O00187 686 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 SH3BP5O60239 455 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 TBC1D4O60343 1298 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 PROP1O75360 226 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 IL6RP08887 468 aaPredicted RBP4.61□□□□□ -1.67
VPS50-209ENST00000467326 BRAFP15056 766 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 NDUFB7P17568 137 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 ATF3P18847 181 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 ITPKBP27987 946 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 CD38P28907 300 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 CCT8P50990 548 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 PDE6CP51160 858 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 SOX10P56693 466 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 MYO1EQ12965 1108 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 CTBP1Q13363 440 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 BIRC2Q13490 618 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 GRM3Q14832 879 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 LLGL1Q15334 1064 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 PPP4R4Q6NUP7 873 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 CCDC149Q6ZUS6 474 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 GAS2L3Q86XJ1 694 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 RASAL3Q86YV0 1011 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 SLC15A3Q8IY34 581 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 ZNF384Q8TF68 577 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
VPS50-209ENST00000467326 ANKS1AQ92625 1134 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 PMM1Q92871 262 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 SUCLG2Q96I99 432 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 MESP1Q9BRJ9 268 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 GLOD4Q9HC38 313 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 ARHGEF3Q9NR81 526 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 SH2B3Q9UQQ2 575 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 WNT6Q9Y6F9 365 aa4.61□□□□□ -1.67
VPS50-209ENST00000467326 A0A0U1RQG5 324 aaPredicted RBP4.6□□□□□ -1.67
VPS50-209ENST00000467326 TMEM233B4DJY2 109 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 hCG_1984214I3L0E3 225 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 TPP1O14773 563 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 PRC1O43663 620 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 LIPAP38571 399 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 MRPS21P82921 87 aaKnown RBP4.6□□□□□ -1.67
VPS50-209ENST00000467326 SP2Q02086 613 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 NHLH1Q02575 133 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 OS9Q13438 667 aaPredicted RBP4.6□□□□□ -1.67
VPS50-209ENST00000467326 GBX1Q14549 363 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 ZIK1Q3SY52 487 aaPredicted RBP4.6□□□□□ -1.67
VPS50-209ENST00000467326 TREML2Q5T2D2 321 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 DEPDC1Q5TB30 811 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 DCAF12L1Q5VU92 463 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 SRGAP1Q7Z6B7 1085 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 ZNF280BQ86YH2 543 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 WDR75Q8IWA0 830 aaKnown RBP4.6□□□□□ -1.67
VPS50-209ENST00000467326 LRTOMTQ8WZ04 291 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 RAPGEF4Q8WZA2 1011 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 MAML1Q92585 1016 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 ZNF518BQ9C0D4 1074 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 SMURF2Q9HAU4 748 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 PRDM11Q9NQV5 511 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 STK32BQ9NY57 414 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 AFF4Q9UHB7 1163 aaKnown RBP4.6□□□□□ -1.67
VPS50-209ENST00000467326 TPCN1Q9ULQ1 816 aa4.6□□□□□ -1.67
VPS50-209ENST00000467326 MRPS17Q9Y2R5 130 aaKnown RBP4.6□□□□□ -1.67
VPS50-209ENST00000467326 TRIM43BA6NCK2 446 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 MBD3L4A6NDZ8 208 aaPredicted RBP4.59□□□□□ -1.67
VPS50-209ENST00000467326 MBD3L3A6NE82 208 aaPredicted RBP4.59□□□□□ -1.67
VPS50-209ENST00000467326 ISM1B1AKI9 464 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 USP19O94966 1318 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 ONECUT2O95948 504 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 ZBED1O96006 694 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 FESP07332 822 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 CSF1RP07333 972 aa4.59□□□□□ -1.67
VPS50-209ENST00000467326 JUPP14923 745 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms