RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 SLC9A1P19634 815 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 YWHAEP62258 255 aaKnown RBP11.74□□□□□ -0.53
MSH5-212ENST00000467319 APBA1Q02410 837 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 VEPH1Q14D04 833 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 DDR2Q16832 855 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 ARHGAP17Q68EM7 881 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 IQCEQ6IPM2 695 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 POTEHQ6S545 545 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 GAREM2Q75VX8 874 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 PDZD4Q76G19 769 aaPredicted RBP11.74□□□□□ -0.53
MSH5-212ENST00000467319 DNAJB7Q7Z6W7 309 aaPredicted RBP11.74□□□□□ -0.53
MSH5-212ENST00000467319 HS6ST3Q8IZP7 471 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 GJD3Q8N144 294 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 C12orf29Q8N999 325 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 STKLD1Q8NE28 680 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 SHKBP1Q8TBC3 707 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 SLC2A14Q8TDB8 520 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 FGF13Q92913 245 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 TCEAL4Q96EI5 215 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 SMARCD1Q96GM5 515 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 RPGRIP1Q96KN7 1286 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 MYRFLQ96LU7 910 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 ZNF512Q96ME7 567 aaPredicted RBP11.74□□□□□ -0.53
MSH5-212ENST00000467319 HNRNPABQ99729 332 aaKnown RBP11.74□□□□□ -0.53
MSH5-212ENST00000467319 TTLL2Q9BWV7 592 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 CSNK1G1Q9HCP0 422 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 FAM49BQ9NUQ9 324 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.74□□□□□ -0.53
MSH5-212ENST00000467319 AJAP1Q9UKB5 411 aaPredicted RBP11.74□□□□□ -0.53
MSH5-212ENST00000467319 CDH7Q9ULB5 785 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 ZFP37Q9Y6Q3 630 aaPredicted RBP11.74□□□□□ -0.53
MSH5-212ENST00000467319 ATP8B3O60423 1300 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 SLC38A8A6NNN8 435 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 TRIM66O15016 1216 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 CAVIN2O95810 425 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 SP100P23497 879 aaPredicted RBP11.73□□□□□ -0.53
MSH5-212ENST00000467319 COPB1P53618 953 aaKnown RBP11.73□□□□□ -0.53
MSH5-212ENST00000467319 KCNMA1Q12791 1236 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 MTMR3Q13615 1198 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 SDHAF4Q5VUM1 108 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 DENND4CQ5VZ89 1909 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 GJB7Q6PEY0 223 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 RRAGAQ7L523 313 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 ENOSF1Q7L5Y1 443 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 TMEM150AQ86TG1 271 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 ZMIZ2Q8NF64 920 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 GPR152Q8TDT2 470 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 NUP210Q8TEM1 1887 aaPredicted RBP11.73□□□□□ -0.53
MSH5-212ENST00000467319 GIPC2Q8TF65 315 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 SHC3Q92529 594 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 CBX8Q9HC52 389 aa11.73□□□□□ -0.53
MSH5-212ENST00000467319 DMAP1Q9NPF5 467 aaPredicted RBP11.73□□□□□ -0.53
MSH5-212ENST00000467319 KIF26AQ9ULI4 1882 aaPredicted RBP11.73□□□□□ -0.53
MSH5-212ENST00000467319 MRPS23Q9Y3D9 190 aaKnown RBP11.73□□□□□ -0.53
MSH5-212ENST00000467319 NCANO14594 1321 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 FAM92AA1XBS5 289 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 ANHXE9PGG2 379 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 O00370 1275 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 ZNF197O14709 1029 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 TNFRSF10BO14763 440 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 AP1G2O75843 785 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 FGF19O95750 216 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 PAEPP09466 180 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 CSH1P0DML2 217 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 CSH2P0DML3 217 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 LAMP2P13473 410 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 TRIM21P19474 475 aaKnown RBP11.72□□□□□ -0.53
MSH5-212ENST00000467319 RFX1P22670 979 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 USP46P62068 366 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 HTR4Q13639 388 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 PPP1R26Q5T8A7 1209 aaPredicted RBP11.72□□□□□ -0.53
MSH5-212ENST00000467319 CYP4A22Q5TCH4 519 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 TMEM270Q6UE05 265 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 CLEC20AQ6ZU45 233 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 CREBRFQ8IUR6 639 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 SCN4BQ8IWT1 228 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 RBBP8NLQ8NC74 664 aaPredicted RBP11.72□□□□□ -0.53
MSH5-212ENST00000467319 ING5Q8WYH8 240 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 ACSF2Q96CM8 615 aaPredicted RBP11.72□□□□□ -0.53
MSH5-212ENST00000467319 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 SMOQ99835 787 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 ZSWIM1Q9BR11 485 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 NAA15Q9BXJ9 866 aaKnown RBP11.72□□□□□ -0.53
MSH5-212ENST00000467319 DNAI2Q9GZS0 605 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 GANQ9H2C0 597 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 PNPLA8Q9NP80 782 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 GDE1Q9NZC3 331 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 IL37Q9NZH6 218 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 SIK3Q9Y2K2 1263 aa11.72□□□□□ -0.53
MSH5-212ENST00000467319 ZNF638Q14966 1978 aaKnown RBP11.71□□□□□ -0.53
MSH5-212ENST00000467319 A0A1W2PRU2 124 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 SMTNL1A8MU46 457 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 BECN2A8MW95 431 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 HHLA1C9JL84 531 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 RNF225M0QZC1 329 aaPredicted RBP11.71□□□□□ -0.53
MSH5-212ENST00000467319 BEST1O76090 585 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms