RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 MAGEA11P43364 429 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
UBR4-211ENST00000467272 FOXC1Q12948 553 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 CRY1Q16526 586 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 SV2CQ496J9 727 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 USP39Q53GS9 565 aaKnown RBP13.11□□□□□ -0.31
UBR4-211ENST00000467272 ADALQ6DHV7 355 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 SLFN12LQ6IEE8 588 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 ZNF720Q7Z2F6 126 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 OSTM1Q86WC4 334 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 FAM184AQ8NB25 1140 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 TSTD1Q8NFU3 115 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 RAD54LQ92698 747 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 FUBP3Q96I24 572 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBR4-211ENST00000467272 SCNM1Q9BWG6 230 aa13.11□□□□□ -0.31
UBR4-211ENST00000467272 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
UBR4-211ENST00000467272 ATG2BQ96BY7 2078 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 TRAV19A0A0A6YYK7 116 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 TNFRSF10BO14763 440 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 IL18RAPO95256 599 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 PFKLP17858 780 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 P2RY2P41231 377 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 DGKEP52429 567 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 TSPY1Q01534 308 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 MCM6Q14566 821 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 SFTPA1Q8IWL2 248 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 ADGRG2Q8IZP9 1017 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 TMEM86AQ8N2M4 240 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 LRRC52Q8N7C0 313 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 ARL14EPQ8N8R7 260 aaPredicted RBP13.1□□□□□ -0.31
UBR4-211ENST00000467272 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 SH3RF2Q8TEC5 729 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 TPSD1Q9BZJ3 242 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 TMEM74BQ9NUR3 256 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 MBD1Q9UIS9 605 aaPredicted RBP13.1□□□□□ -0.31
UBR4-211ENST00000467272 SIX4Q9UIU6 781 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 GTF3C4Q9UKN8 822 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 MAGED2Q9UNF1 606 aaPredicted RBP13.1□□□□□ -0.31
UBR4-211ENST00000467272 INVSQ9Y283 1065 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 NEUROG3Q9Y4Z2 214 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 ASCC3Q8N3C0 2202 aaKnown RBP13.1□□□□□ -0.31
UBR4-211ENST00000467272 MYH11P35749 1972 aa13.1□□□□□ -0.31
UBR4-211ENST00000467272 PTPRDP23468 1912 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 HCRTO43612 131 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 FAM13AO94988 1023 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 PLCG1P19174 1290 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 ACAT1P24752 427 aaKnown RBP13.09□□□□□ -0.31
UBR4-211ENST00000467272 KIR2DL1P43626 348 aaPredicted RBP13.09□□□□□ -0.31
UBR4-211ENST00000467272 SLC7A9P82251 487 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 MRPS21P82921 87 aaKnown RBP13.09□□□□□ -0.31
UBR4-211ENST00000467272 GRIN1Q05586 938 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 KCNA1Q09470 495 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 SEMA3BQ13214 749 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 SOWAHAQ2M3V2 549 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 MAP7D1Q3KQU3 841 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 SLC23A3Q6PIS1 610 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 PHTF2Q8N3S3 785 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 TOP6BLQ8N6T0 577 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 IL17RCQ8NAC3 791 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 HVCN1Q96D96 273 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 ZNF560Q96MR9 790 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 TTLL2Q9BWV7 592 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 DDX43Q9NXZ2 648 aaKnown RBP13.09□□□□□ -0.31
UBR4-211ENST00000467272 MSRB2Q9Y3D2 182 aa13.09□□□□□ -0.31
UBR4-211ENST00000467272 NUP205Q92621 2012 aa13.08□□□□□ -0.31
UBR4-211ENST00000467272 TAF4O00268 1085 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 KALRNO60229 2985 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 ADAM23O75077 832 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 CYP17A1P05093 508 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 CKMP06732 381 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 POLR2BP30876 1174 aaKnown RBP13.08□□□□□ -0.32
UBR4-211ENST00000467272 GBP1P32455 592 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 EIF2DP41214 584 aaKnown RBP13.08□□□□□ -0.32
UBR4-211ENST00000467272 PTGER3P43115 390 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 IFNAR2P48551 515 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 USP46P62068 366 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
UBR4-211ENST00000467272 C2orf27AQ580R0 203 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 ANO7Q6IWH7 933 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 CYP2U1Q7Z449 544 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 BRSK2Q8IWQ3 736 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 FRMD1Q8N878 549 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 DEFB124Q8NES8 71 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 KBTBD7Q8WVZ9 684 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 CDK5RAP3Q96JB5 506 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 PILRBQ9UKJ0 227 aa13.08□□□□□ -0.32
UBR4-211ENST00000467272 TNRC6BQ9UPQ9 1833 aaKnown RBP13.08□□□□□ -0.32
UBR4-211ENST00000467272 FLNBO75369 2602 aaKnown RBP13.08□□□□□ -0.32
UBR4-211ENST00000467272 PCNX2A6NKB5 2137 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 CFAP46Q8IYW2 2715 aa13.07□□□□□ -0.32
UBR4-211ENST00000467272 ZNF840PA6NDX5 716 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms