RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 RPL34P49207 117 aaKnown RBP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 AARSP49588 968 aaKnown RBP eCLIP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 RPL7AP62424 266 aaKnown RBP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 ZNF252P-AS1Q0IIN9 211 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 ZNF211Q13398 564 aaPredicted RBP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 ORC1Q13415 861 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 NNTQ13423 1086 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 CUL1Q13616 776 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 DHX34Q14147 1143 aaKnown RBP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 ZNF618Q5T7W0 954 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 EMBQ6PCB8 327 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 HDXQ7Z353 690 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 PHLDB2Q86SQ0 1253 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 TMEM110Q86TL2 294 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 CPNE8Q86YQ8 564 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 ZDHHC17Q8IUH5 632 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 PRELID2Q8N945 189 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 C12orf50Q8NA57 414 aaPredicted RBP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 ANKRD52Q8NB46 1076 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 OR6B3Q8NGW1 331 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 EXD1Q8NHP7 514 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 AENQ8WTP8 325 aaKnown RBP10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 SLC35F5Q8WV83 523 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 TNIP3Q96KP6 325 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 MCEEQ96PE7 176 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 CPXM1Q96SM3 734 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 GAD1Q99259 594 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 AP1M1Q9BXS5 423 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 SNX25Q9H3E2 840 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 SYNCQ9H7C4 482 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 VIPAS39Q9H9C1 493 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 STARD7Q9NQZ5 370 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 HESX1Q9UBX0 185 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 PCYOX1Q9UHG3 505 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 THSD7BQ9C0I4 1608 aa10.06□□□□□ -0.8
APOBEC1-202ENST00000467171 ARL5CA6NH57 179 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 HEXIM1O94992 359 aaKnown RBP10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 ERBB2P04626 1255 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 FGFR1P11362 822 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 CKBP12277 381 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 PTPN7P35236 360 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 MLH1P40692 756 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 CETN2P41208 172 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 FNTAP49354 379 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 CDK7P50613 346 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 DRG2P55039 364 aaKnown RBP10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 TAS2R40P59535 323 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 FAM189BP81408 668 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 SLC7A5Q01650 507 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 OGDHQ02218 1023 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 SIX1Q15475 284 aaPredicted RBP10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 GOLGA7BQ2TAP0 167 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 PPP1R26Q5T8A7 1209 aaPredicted RBP10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 ARCQ7LC44 396 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 POLNQ7Z5Q5 900 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 ACOT1Q86TX2 421 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 ZNF598Q86UK7 904 aaKnown RBP10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 TTC30AQ86WT1 665 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 KLHL7Q8IXQ5 586 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 RCOR2Q8IZ40 523 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 ADGRF2Q8IZF7 708 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 ZDHHC14Q8IZN3 488 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 TMEM86AQ8N2M4 240 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 CAVIN3Q969G5 261 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 RBM41Q96IZ5 413 aaKnown RBP10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 HSFY1Q96LI6 401 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 ZFP42Q96MM3 310 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 UROC1Q96N76 676 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 DDX47Q9H0S4 455 aaKnown RBP10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 LRRC19Q9H756 370 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 RSAD1Q9HA92 442 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 RGS18Q9NS28 235 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 HOMER3Q9NSC5 361 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 DDX56Q9NY93 547 aaKnown RBP10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 NR2E1Q9Y466 385 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 PTCH2Q9Y6C5 1203 aa10.05□□□□□ -0.8
APOBEC1-202ENST00000467171 ANK1P16157 1881 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 MEIS3P2A8K0S8 358 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 KBTBD13C9JR72 458 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 DNM1LO00429 736 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 PODXLO00592 558 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 CYB561D2O14569 222 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 LCE2BO14633 110 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 MGEA5O60502 916 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 ZMYND10O75800 440 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 SASH3O75995 380 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 EOMESO95936 686 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 RARAP10276 462 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 COL6A1P12109 1028 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 PSMA2P25787 234 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 GBP1P32455 592 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 RFC1P35251 1148 aaPredicted RBP10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 ACADSBP45954 432 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 LHX1P48742 406 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 BCAT1P54687 386 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 EPHB4P54760 987 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 GUCY2DQ02846 1103 aa10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 BST2Q10589 180 aaKnown RBP10.04□□□□□ -0.8
APOBEC1-202ENST00000467171 GRIK3Q13003 919 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms