RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 GPR35Q9HC97 309 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 SLAMF7Q9NQ25 335 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 MRPS18AQ9NVS2 196 aaKnown RBP4.96□□□□□ -1.62
XRN1-206ENST00000467077 SERTAD3Q9UJW9 196 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 HS3ST3B1Q9Y662 390 aa4.96□□□□□ -1.62
XRN1-206ENST00000467077 A1BGP04217 495 aa4.95□□□□□ -1.62
XRN1-206ENST00000467077 RPLP2P05387 115 aaKnown RBP4.95□□□□□ -1.62
XRN1-206ENST00000467077 FAM187BQ17R55 369 aa4.95□□□□□ -1.62
XRN1-206ENST00000467077 MTHFD1LQ6UB35 978 aa4.95□□□□□ -1.62
XRN1-206ENST00000467077 LAYNQ6UX15 382 aa4.95□□□□□ -1.62
XRN1-206ENST00000467077 PIP4P1Q86T03 277 aa4.95□□□□□ -1.62
XRN1-206ENST00000467077 ZNF548Q8NEK5 533 aaPredicted RBP4.95□□□□□ -1.62
XRN1-206ENST00000467077 R3HDM4Q96D70 268 aa4.95□□□□□ -1.62
XRN1-206ENST00000467077 SIGLEC11Q96RL6 698 aa4.95□□□□□ -1.62
XRN1-206ENST00000467077 ZNF277Q9NRM2 450 aaPredicted RBP4.95□□□□□ -1.62
XRN1-206ENST00000467077 HEY2Q9UBP5 337 aa4.95□□□□□ -1.62
XRN1-206ENST00000467077 GCATO75600 419 aa4.94□□□□□ -1.62
XRN1-206ENST00000467077 TJP3O95049 919 aa4.94□□□□□ -1.62
XRN1-206ENST00000467077 RARBP10826 455 aa4.94□□□□□ -1.62
XRN1-206ENST00000467077 TAF7LQ5H9L4 462 aa4.94□□□□□ -1.62
XRN1-206ENST00000467077 L1TD1Q5T7N2 865 aaKnown RBP4.94□□□□□ -1.62
XRN1-206ENST00000467077 GFI1BQ5VTD9 330 aa4.94□□□□□ -1.62
XRN1-206ENST00000467077 TRMT13Q9NUP7 481 aaKnown RBP4.94□□□□□ -1.62
XRN1-206ENST00000467077 PRSS47A8MTI9 375 aa4.93□□□□□ -1.62
XRN1-206ENST00000467077 GNAI2P04899 355 aa4.93□□□□□ -1.62
XRN1-206ENST00000467077 ALDH5A1P51649 535 aaPredicted RBP4.93□□□□□ -1.62
XRN1-206ENST00000467077 ASIC2Q16515 512 aa4.93□□□□□ -1.62
XRN1-206ENST00000467077 ANO7Q6IWH7 933 aa4.93□□□□□ -1.62
XRN1-206ENST00000467077 SLC15A3Q8IY34 581 aa4.93□□□□□ -1.62
XRN1-206ENST00000467077 ATG4AQ8WYN0 398 aa4.93□□□□□ -1.62
XRN1-206ENST00000467077 GLG1Q92896 1179 aa4.93□□□□□ -1.62
XRN1-206ENST00000467077 MMS19Q96T76 1030 aa4.93□□□□□ -1.62
XRN1-206ENST00000467077 TLDC2A0PJX2 215 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 A1L4Q6 167 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 M0QYG6 137 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 F2RL2O00254 374 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 PPIFP30405 207 aaKnown RBP4.92□□□□□ -1.62
XRN1-206ENST00000467077 ZXDBP98169 803 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 TCF15Q12870 199 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 CLUL1Q15846 466 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 GIMAP6Q6P9H5 292 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 SLC4A10Q6U841 1118 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 PPP1R32Q7Z5V6 425 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 ADAMTS18Q8TE60 1221 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 TMEM184CQ9NVA4 438 aa4.92□□□□□ -1.62
XRN1-206ENST00000467077 TLR2O60603 784 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 SMARCA1P28370 1054 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 CDC25AP30304 524 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 TOB1P50616 345 aaPredicted RBP4.91□□□□□ -1.62
XRN1-206ENST00000467077 GYS2P54840 703 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 LOXL3P58215 753 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 ARHGAP40Q5TG30 622 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 FBXL22Q6P050 247 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 DEF8Q6ZN54 512 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.91□□□□□ -1.62
XRN1-206ENST00000467077 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.91□□□□□ -1.62
XRN1-206ENST00000467077 DDX17Q92841 729 aaKnown RBP4.91□□□□□ -1.62
XRN1-206ENST00000467077 TMEM204Q9BSN7 226 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 THAP7Q9BT49 309 aaPredicted RBP4.91□□□□□ -1.62
XRN1-206ENST00000467077 MLXIPQ9HAP2 919 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 MCM8Q9UJA3 840 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 AGAP1Q9UPQ3 857 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 TMA7Q9Y2S6 64 aaKnown RBP4.91□□□□□ -1.62
XRN1-206ENST00000467077 CUX2O14529 1486 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 ZCCHC6Q5VYS8 1495 aaKnown RBP4.91□□□□□ -1.62
XRN1-206ENST00000467077 DCAF1Q9Y4B6 1507 aa4.91□□□□□ -1.62
XRN1-206ENST00000467077 BTBD19C9JJ37 291 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 MALP21145 153 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 PIK3CGP48736 1102 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 SP2Q02086 613 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 IL10RAQ13651 578 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 C9orf50Q5SZB4 431 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 RFX6Q8HWS3 928 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 PELI3Q8N2H9 469 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.9□□□□□ -1.63
XRN1-206ENST00000467077 TMEM255BQ8WV15 326 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 DPCDQ9BVM2 203 aaPredicted RBP4.9□□□□□ -1.63
XRN1-206ENST00000467077 TTYH3Q9C0H2 523 aa4.9□□□□□ -1.63
XRN1-206ENST00000467077 MRPL44Q9H9J2 332 aaKnown RBP4.9□□□□□ -1.63
XRN1-206ENST00000467077 ERCC6Q03468 1493 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 SLC28A2O43868 658 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 IGKV3-20P01619 116 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 PHKA1P46020 1223 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 PXNP49023 591 aaPredicted RBP4.89□□□□□ -1.63
XRN1-206ENST00000467077 HILS1P60008 231 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 SDE2Q6IQ49 451 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 STRA8Q7Z7C7 330 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 MAP4K1Q92918 833 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 ZFYVE19Q96K21 471 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 CCDC17Q96LX7 622 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 LENG8Q96PV6 779 aaPredicted RBP4.89□□□□□ -1.63
XRN1-206ENST00000467077 VRK1Q99986 396 aaPredicted RBP4.89□□□□□ -1.63
XRN1-206ENST00000467077 SELENONQ9NZV5 590 aa4.89□□□□□ -1.63
XRN1-206ENST00000467077 TCRBV5S1A1TA0A578 114 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 NDUFS2O75306 463 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 PRKCBP05771 671 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 ATXN1LP0C7T5 689 aaKnown RBP4.88□□□□□ -1.63
XRN1-206ENST00000467077 FPR3P25089 353 aa4.88□□□□□ -1.63
XRN1-206ENST00000467077 HSD3B2P26439 372 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms