RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 SRFP11831 508 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 NPR3P17342 541 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 RFX1P22670 979 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 HOXD13P35453 343 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 LHX1P48742 406 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 FMO5P49326 533 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 CASP4P49662 377 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 CDR1P51861 262 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 COPB1P53618 953 aaKnown RBP7.05□□□□□ -1.28
UBXN4-205ENST00000467065 PMS1P54277 932 aaKnown RBP7.05□□□□□ -1.28
UBXN4-205ENST00000467065 MARSP56192 900 aaKnown RBP7.05□□□□□ -1.28
UBXN4-205ENST00000467065 BPIFB4P59827 614 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 LILRA4P59901 499 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 FANCCQ00597 558 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 TWF1Q12792 350 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 TRIM14Q14142 442 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 WDR72Q3MJ13 1102 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 C9orf57Q5W0N0 161 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 CRELD2Q6UXH1 353 aaPredicted RBP7.05□□□□□ -1.28
UBXN4-205ENST00000467065 RNF19BQ6ZMZ0 732 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 TRAPPC11Q7Z392 1133 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 VPS36Q86VN1 386 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 TCEAL8Q8IYN2 117 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 TMEM86AQ8N2M4 240 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 LRRC52Q8N7C0 313 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 EHBP1Q8NDI1 1231 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 MCRS1Q96EZ8 462 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 SENP8Q96LD8 212 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 TMEM209Q96SK2 561 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 CORO1BQ9BR76 489 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 MTMR12Q9C0I1 747 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 TAB2Q9NYJ8 693 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 LIMA1Q9UHB6 759 aaKnown RBP7.05□□□□□ -1.28
UBXN4-205ENST00000467065 ZFP37Q9Y6Q3 630 aaPredicted RBP7.05□□□□□ -1.28
UBXN4-205ENST00000467065 CFAP54Q96N23 3096 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 ATG2BQ96BY7 2078 aa7.05□□□□□ -1.28
UBXN4-205ENST00000467065 WDR87Q6ZQQ6 2873 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 KIAA1549LQ6ZVL6 1849 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 ANO9A1A5B4 782 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 GTPBP10A4D1E9 387 aaKnown RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 LRRC10BA6NIK2 292 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 LRRIQ3A6PVS8 624 aaPredicted RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 H0Y858 1186 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 PIRO00625 290 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 CYB561D2O14569 222 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 OAZ2O95190 189 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 IPO7O95373 1038 aaKnown RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 FAM163BP0C2L3 166 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TRIM49P0CI25 452 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TRIM49CP0CI26 452 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 KRT5P13647 590 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 GJA1P17302 382 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 PTPN2P17706 415 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 AOC1P19801 751 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TYMPP19971 482 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 PCSK1P29120 753 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 POLR2BP30876 1174 aaKnown RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 GNL1P36915 607 aaPredicted RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 CCR2P41597 374 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 CLCN5P51795 746 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 GPC5P78333 572 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TSPY1Q01534 308 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 KRT31Q15323 416 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 MAPRE1Q15691 268 aaKnown RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TAF12Q16514 161 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 ZCWPW2Q504Y3 356 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 PRSS36Q5K4E3 855 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TPGS2Q68CL5 300 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 OVOS1Q6IE37 1185 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 MTSS1LQ765P7 747 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 PDZD4Q76G19 769 aaPredicted RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 SV2AQ7L0J3 742 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 DPH6Q7L8W6 267 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TRIM59Q8IWR1 403 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 DHX40Q8IX18 779 aaKnown RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 DCP1BQ8IZD4 617 aaKnown RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 ELMOD1Q8N336 334 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 PPM1KQ8N3J5 372 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TTC9BQ8N6N2 239 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 OR6B3Q8NGW1 331 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 OR10T2Q8NGX3 314 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 NXPE3Q969Y0 559 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TCEAL4Q96EI5 215 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 FAXDC2Q96IV6 333 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TNIP3Q96KP6 325 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 PRRX2Q99811 253 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 CRISPLD1Q9H336 500 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 TBC1D17Q9HA65 648 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 UBE2TQ9NPD8 197 aaPredicted RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 ARHGEF3Q9NR81 526 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 IFNKQ9P0W0 207 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 GCNT4Q9P109 453 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 CEP72Q9P209 647 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 WNT16Q9UBV4 365 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 AFF4Q9UHB7 1163 aaKnown RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 KIAA1257Q9ULG3 409 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 LUC7L2Q9Y383 392 aaKnown RBP7.04□□□□□ -1.28
UBXN4-205ENST00000467065 YIPF1Q9Y548 306 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 CEP83Q9Y592 693 aa7.04□□□□□ -1.28
UBXN4-205ENST00000467065 SNX9Q9Y5X1 595 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms