RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 NFIL3Q16649 462 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 STXBP5Q5T5C0 1151 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 GAREM2Q75VX8 874 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 DPH6Q7L8W6 267 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 SCN4BQ8IWT1 228 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 C12orf56Q8IXR9 622 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 DEPDC1BQ8WUY9 529 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 IRF7Q92985 503 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 E2F7Q96AV8 911 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 RTN4Q9NQC3 1192 aaKnown RBP17.1■□□□□ 0.33
COL16A1-207ENST00000466829 HEBP1Q9NRV9 189 aa17.1■□□□□ 0.33
COL16A1-207ENST00000466829 FAM170BA6NMN3 283 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 CST3P01034 146 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-207ENST00000466829 CYP2F1P24903 491 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 RPL13P26373 211 aaKnown RBP17.09■□□□□ 0.33
COL16A1-207ENST00000466829 GPR15P49685 360 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 COPB1P53618 953 aaKnown RBP17.09■□□□□ 0.33
COL16A1-207ENST00000466829 CYP4F8P98187 520 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 ANGPT1Q15389 498 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 DDR2Q16832 855 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 HSP90AA4PQ58FG1 418 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 SDHAF4Q5VUM1 108 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 CEP135Q66GS9 1140 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 VITQ6UXI7 678 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 ZNF852Q6ZMS4 543 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 OSTM1Q86WC4 334 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 ARID3BQ8IVW6 561 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-207ENST00000466829 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 MFSD6LQ8IWD5 586 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 SYT15Q9BQS2 421 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 BCO2Q9BYV7 579 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 NXF1Q9UBU9 619 aaKnown RBP17.09■□□□□ 0.33
COL16A1-207ENST00000466829 FRMD4BQ9Y2L6 1034 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 MRPS17Q9Y2R5 130 aaKnown RBP17.09■□□□□ 0.33
COL16A1-207ENST00000466829 ANK1P16157 1881 aa17.09■□□□□ 0.33
COL16A1-207ENST00000466829 NOTCH4Q99466 2003 aa17.08■□□□□ 0.33
COL16A1-207ENST00000466829 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
COL16A1-207ENST00000466829 CETN3O15182 167 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 HCRTO43612 131 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 CSH1P0DML2 217 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 CSH2P0DML3 217 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 CASP4P49662 377 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 GSDMDP57764 484 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 PSMC1P62191 440 aaKnown RBP17.08■□□□□ 0.32
COL16A1-207ENST00000466829 WDR72Q3MJ13 1102 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 C4orf50Q6ZRC1 276 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 SPC24Q8NBT2 197 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 OR6B3Q8NGW1 331 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 CSGALNACT1Q8TDX6 532 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 TMEM174Q8WUU8 243 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 DNASE1L2Q92874 299 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 TRPV4Q9HBA0 871 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 ABCB6Q9NP58 842 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 CDH9Q9ULB4 789 aa17.08■□□□□ 0.32
COL16A1-207ENST00000466829 MYBPHLA2RUH7 354 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 GABRDO14764 452 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 NCAM2O15394 837 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 ATP2C2O75185 946 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 LRRN2O75325 713 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 NR3C1P04150 777 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 LMO2P25791 158 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 GNL1P36915 607 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-207ENST00000466829 MARSP56192 900 aaKnown RBP17.07■□□□□ 0.32
COL16A1-207ENST00000466829 MYL6P60660 151 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 CYP27A1Q02318 531 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 ADAM9Q13443 819 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 MAPRE1Q15691 268 aaKnown RBP17.07■□□□□ 0.32
COL16A1-207ENST00000466829 STKLD1Q8NE28 680 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 ZNF516Q92618 1163 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 CNOT6LQ96LI5 555 aaKnown RBP17.07■□□□□ 0.32
COL16A1-207ENST00000466829 TASP1Q9H6P5 420 aa17.07■□□□□ 0.32
COL16A1-207ENST00000466829 MTF2Q9Y483 593 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-207ENST00000466829 MAN2B1O00754 1011 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 PRKCSHP14314 528 aaPredicted RBP17.06■□□□□ 0.32
COL16A1-207ENST00000466829 WARSP23381 471 aaKnown RBP17.06■□□□□ 0.32
COL16A1-207ENST00000466829 AVPR1AP37288 418 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 GRIK1P39086 918 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 KPNA1P52294 538 aaPredicted RBP17.06■□□□□ 0.32
COL16A1-207ENST00000466829 AP3M2P53677 418 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 CCDC142Q17RM4 750 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 CCDC186Q7Z3E2 898 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 TMC6Q7Z403 805 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 KBTBD7Q8WVZ9 684 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 MRPS31Q92665 395 aaKnown RBP17.06■□□□□ 0.32
COL16A1-207ENST00000466829 NELL2Q99435 816 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 MRPL45Q9BRJ2 306 aaKnown RBP17.06■□□□□ 0.32
COL16A1-207ENST00000466829 TUBGCP2Q9BSJ2 902 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 LTB4R2Q9NPC1 389 aa17.06■□□□□ 0.32
COL16A1-207ENST00000466829 SPATA6Q9NWH7 488 aaPredicted RBP17.06■□□□□ 0.32
COL16A1-207ENST00000466829 THG1LQ9NWX6 298 aaKnown RBP17.06■□□□□ 0.32
COL16A1-207ENST00000466829 UXTQ9UBK9 157 aaPredicted RBP17.06■□□□□ 0.32
COL16A1-207ENST00000466829 NDRG2Q9UN36 371 aaKnown RBP17.06■□□□□ 0.32
COL16A1-207ENST00000466829 SLC38A8A6NNN8 435 aa17.05■□□□□ 0.32
COL16A1-207ENST00000466829 LRRIQ3A6PVS8 624 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-207ENST00000466829 LGALS16A8MUM7 142 aa17.05■□□□□ 0.32
COL16A1-207ENST00000466829 BDNFP23560 247 aa17.05■□□□□ 0.32
COL16A1-207ENST00000466829 ANXA13P27216 316 aa17.05■□□□□ 0.32
COL16A1-207ENST00000466829 ATICP31939 592 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms