RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 RARBP10826 455 aa13.62□□□□□ -0.23
PDZRN3-205ENST00000466780 CIAPIN1Q6FI81 312 aa13.62□□□□□ -0.23
PDZRN3-205ENST00000466780 DCUN1D2Q6PH85 259 aa13.62□□□□□ -0.23
PDZRN3-205ENST00000466780 CHSY1Q86X52 802 aa13.62□□□□□ -0.23
PDZRN3-205ENST00000466780 SCYL3Q8IZE3 742 aa13.62□□□□□ -0.23
PDZRN3-205ENST00000466780 FAM111AQ96PZ2 611 aa13.62□□□□□ -0.23
PDZRN3-205ENST00000466780 KRT82Q9NSB4 513 aa13.62□□□□□ -0.23
PDZRN3-205ENST00000466780 STX18Q9P2W9 335 aaKnown RBP13.62□□□□□ -0.23
PDZRN3-205ENST00000466780 WASF2Q9Y6W5 498 aa13.62□□□□□ -0.23
PDZRN3-205ENST00000466780 E5RJQ4 531 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 FCHO1O14526 889 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 NDC80O14777 642 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 MT-ND3P03897 115 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 ESRRAP11474 423 aaPredicted RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 AP1B1Q10567 949 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 CWF19L1Q69YN2 538 aaKnown RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 PALM2Q8IXS6 379 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 UBR7Q8N806 425 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 RMDN3Q96TC7 470 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 POLR3FQ9H1D9 316 aaPredicted RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 GINM1Q9NU53 330 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 DDX56Q9NY93 547 aaKnown RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 ARMCX1Q9P291 453 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 ZNF70Q9UC06 446 aaPredicted RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 STYXL1Q9Y6J8 313 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 SNUPNO95149 360 aaKnown RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 CALB1P05937 261 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 MYL2P10916 166 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 SKIP12755 728 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 AMPD1P23109 780 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 RTP1P59025 263 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 PPP1R2P3Q6NXS1 205 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 ZC3H18Q86VM9 953 aaKnown RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 WDTC1Q8N5D0 677 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 ARFGAP1Q8N6T3 406 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 TTC17Q96AE7 1141 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 OXNAD1Q96HP4 312 aaPredicted RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 NMUR2Q9GZQ4 415 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 VCXQ9H320 206 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 MMADHCQ9H3L0 296 aaPredicted RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 PXMP2Q9NR77 195 aa13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 RBAKQ9NYW8 714 aaPredicted RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
PDZRN3-205ENST00000466780 FAM237BA0A1B0GVD1 139 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 CST8O60676 142 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 DGAT1O75907 488 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 ITGBL1O95965 494 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 TBXAS1P24557 533 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 BRD2P25440 801 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 CPA2P48052 419 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 NRLP54845 237 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 FAAP100Q0VG06 881 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 DGKZQ13574 1117 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 THOC5Q13769 683 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 PIGHQ14442 188 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 SMTNL2Q2TAL5 461 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 HSF5Q4G112 596 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 CYP4A22Q5TCH4 519 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 AP1ARQ63HQ0 302 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 ALYREFQ86V81 257 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 UNC45BQ8IWX7 931 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 GALNT15Q8N3T1 639 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 MCPH1Q8NEM0 835 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 FBXO27Q8NI29 283 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 APOPT1Q96IL0 206 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 XPO7Q9UIA9 1087 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 CHMP2BQ9UQN3 213 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 AP1G2O75843 785 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 IL1R2P27930 398 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 RAB27AP51159 221 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 SLC18A2Q05940 514 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 PTK7Q13308 1070 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 BIRC2Q13490 618 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 KCNT1Q5JUK3 1230 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 SWSAP1Q6NVH7 229 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 NIPA2Q8N8Q9 360 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 GATA6Q92908 595 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 WDR35Q9P2L0 1181 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 SCOCQ9UIL1 159 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 STRIP2Q9ULQ0 834 aa13.6□□□□□ -0.23
PDZRN3-205ENST00000466780 CNTNAP2Q9UHC6 1331 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 PYGBP11216 843 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 PGM1P36871 562 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 ROR2Q01974 943 aaKnown RBP13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 SLC25A11Q02978 314 aaKnown RBP13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 SEZ6Q53EL9 994 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 FAM91A1Q658Y4 838 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 RFX8Q6ZV50 586 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 TREML1Q86YW5 311 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 MFN1Q8IWA4 741 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 PDCD7Q8N8D1 485 aaKnown RBP13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 RDM1Q8NG50 284 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 STMN2Q93045 179 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 CYTH2Q99418 400 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 CGRRF1Q99675 332 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 ZNF341Q9BYN7 854 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms