RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 CDH9Q9ULB4 789 aa12.81□□□□□ -0.36
GTF3A-205ENST00000466776 PCDHGA5Q9Y5G8 931 aa12.81□□□□□ -0.36
GTF3A-205ENST00000466776 MORC2Q9Y6X9 1032 aaPredicted RBP12.81□□□□□ -0.36
GTF3A-205ENST00000466776 ACACBO00763 2458 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 FRMD3A2A2Y4 597 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 ZNF233A6NK53 670 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 NFATC1O95644 943 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 EGFP01133 1207 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 ZNF806P0C7X5 589 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 ARSAP15289 507 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 GJA4P35212 333 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 CASP5P51878 434 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 AMPD3Q01432 767 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 USP4Q13107 963 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 PSMD2Q13200 908 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 ELF2Q15723 593 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 ZNF77Q15935 545 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 DUOXA2Q1HG44 320 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 SDHAF4Q5VUM1 108 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 VSTM1Q6UX27 236 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 STKLD1Q8NE28 680 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 HPDLQ96IR7 371 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 CLIC6Q96NY7 704 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 SYT15Q9BQS2 421 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 ZSCAN16Q9H4T2 348 aaPredicted RBP12.8□□□□□ -0.36
GTF3A-205ENST00000466776 PCIF1Q9H4Z3 704 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 ECT2Q9H8V3 914 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 KIAA1586Q9HCI6 787 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 PDE11AQ9HCR9 933 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 C2orf42Q9NWW7 574 aa12.8□□□□□ -0.36
GTF3A-205ENST00000466776 MYOFQ9NZM1 2061 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 GABRDO14764 452 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 TRIM66O15016 1216 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 TADA3O75528 432 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 RHOBTB1O94844 696 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 PRPF6O94906 941 aaKnown RBP12.79□□□□□ -0.36
GTF3A-205ENST00000466776 APBB3O95704 486 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 HDCP19113 662 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 GRIK1P39086 918 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 RAP1GAPP47736 663 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 PXNP49023 591 aaPredicted RBP12.79□□□□□ -0.36
GTF3A-205ENST00000466776 GALK1P51570 392 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 WNT7BP56706 349 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 RESTQ13127 1097 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 SOWAHAQ2M3V2 549 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 PKN3Q6P5Z2 889 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 SYT13Q7L8C5 426 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 C11orf74Q86VG3 221 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 WDR49Q8IV35 697 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 RPLP0P6Q8NHW5 317 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 SH3RF2Q8TEC5 729 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 ZC3H10Q96K80 434 aaKnown RBP12.79□□□□□ -0.36
GTF3A-205ENST00000466776 SPATA17Q96L03 361 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 PKMYT1Q99640 499 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 TNMDQ9H2S6 317 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 VPS45Q9NRW7 570 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 INTS13Q9NVM9 706 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 TRPM5Q9NZQ8 1165 aa12.79□□□□□ -0.36
GTF3A-205ENST00000466776 OTOL1A6NHN0 477 aaPredicted RBP12.78□□□□□ -0.36
GTF3A-205ENST00000466776 GDF9O60383 454 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 TCF3P15923 654 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 SYT1P21579 422 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 MPLP40238 635 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 PPP3CCP48454 512 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 CYP27A1Q02318 531 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 SLC39A14Q15043 492 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 STK38Q15208 465 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 FAM171BQ6P995 826 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 DENND5BQ6ZUT9 1274 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 KBTBD6Q86V97 674 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 OSTM1Q86WC4 334 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 PDILTQ8N807 584 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 ARL14EPQ8N8R7 260 aaPredicted RBP12.78□□□□□ -0.36
GTF3A-205ENST00000466776 ZSWIM2Q8NEG5 633 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 MYLPFQ96A32 169 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 CHFRQ96EP1 664 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 CHAMP1Q96JM3 812 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 FNBP1Q96RU3 617 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 MMS19Q96T76 1030 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 CUEDC2Q9H467 287 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 SIX4Q9UIU6 781 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 ARHGAP26Q9UNA1 814 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 WNT6Q9Y6F9 365 aa12.78□□□□□ -0.36
GTF3A-205ENST00000466776 MYO18AQ92614 2054 aaKnown RBP12.77□□□□□ -0.36
GTF3A-205ENST00000466776 SLC9A3R1O14745 358 aaPredicted RBP12.77□□□□□ -0.37
GTF3A-205ENST00000466776 EIF3DO15371 548 aaKnown RBP eCLIP12.77□□□□□ -0.37
GTF3A-205ENST00000466776 WARSP23381 471 aaKnown RBP12.77□□□□□ -0.37
GTF3A-205ENST00000466776 PSMC1P62191 440 aaKnown RBP12.77□□□□□ -0.37
GTF3A-205ENST00000466776 DMC1Q14565 340 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 SF3A2Q15428 464 aaKnown RBP12.77□□□□□ -0.37
GTF3A-205ENST00000466776 EML3Q32P44 896 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 KIAA1958Q8N8K9 716 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 CXorf38Q8TB03 319 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 RIN3Q8TB24 985 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 INTS4Q96HW7 963 aaKnown RBP12.77□□□□□ -0.37
GTF3A-205ENST00000466776 USP28Q96RU2 1077 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 CYP2S1Q96SQ9 504 aa12.77□□□□□ -0.37
GTF3A-205ENST00000466776 SNX25Q9H3E2 840 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms