RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 UBALD2Q8IYN6 164 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 SLC44A3Q8N4M1 653 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 B3GALNT2Q8NCR0 500 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 FLCNQ8NFG4 579 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ZSCAN18Q8TBC5 510 aaPredicted RBP10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 SPATA18Q8TC71 538 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 TMEM174Q8WUU8 243 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 SEMA4DQ92854 862 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ZSWIM3Q96MP5 696 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 PPP1R9BQ96SB3 815 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 DUSP9Q99956 384 aaKnown RBP10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 LRRC3Q9BY71 257 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 PLA2G2FQ9BZM2 168 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ZNF518BQ9C0D4 1074 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 APOBEC3GQ9HC16 384 aaKnown RBP10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ARMCX3Q9UH62 379 aaPredicted RBP10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ASB3Q9Y575 518 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 SLC38A8A6NNN8 435 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 STX10O60499 249 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 CSH1P0DML2 217 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 CSH2P0DML3 217 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 CCDC130P13994 396 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 PTPN1P18031 435 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 COL9A1P20849 921 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 ADORA2BP29275 332 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 CLCN1P35523 988 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 VIPR2P41587 438 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 NDST1P52848 882 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 RPL10AP62906 217 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 MAPRE1Q15691 268 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 TPD52L1Q16890 204 aaPredicted RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 ZSCAN23Q3MJ62 389 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 ARHGAP15Q53QZ3 475 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 FAM78AQ5JUQ0 283 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 TANGO2Q6ICL3 276 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 CAVIN1Q6NZI2 390 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 FAM171BQ6P995 826 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 LRSAM1Q6UWE0 723 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 GAREM2Q75VX8 874 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 LIMS2Q7Z4I7 341 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 SUGP1Q8IWZ8 645 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 ZC3H3Q8IXZ2 948 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 SIX5Q8N196 739 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 TRIML1Q8N9V2 468 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 LEMD2Q8NC56 503 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 FBXL13Q8NEE6 735 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 MYCBPAPQ8TBZ2 947 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 JAKMIP2Q96AA8 810 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 ASIC4Q96FT7 647 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 SRRTQ9BXP5 876 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 NIF3L1Q9GZT8 377 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 SMG9Q9H0W8 520 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 VRTNQ9H8Y1 702 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 TRPC7Q9HCX4 862 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 AVENQ9NQS1 362 aaPredicted RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 FAM49BQ9NUQ9 324 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 RAB20Q9NX57 234 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 HSFX1Q9UBD0 423 aa10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 ZFP37Q9Y6Q3 630 aaPredicted RBP10.37□□□□□ -0.75
RTFDC1-205ENST00000466260 NCANO14594 1321 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 COL4A2P08572 1712 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 ANHXE9PGG2 379 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 F8VP50 259 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 SRFP11831 508 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 CDC25CP30307 473 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 CACNA2D1P54289 1103 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 EPHA5P54756 1037 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 GPC5P78333 572 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 CFAP221Q4G0U5 840 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 HSP90AA4PQ58FG1 418 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 WDR44Q5JSH3 913 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 FILIP1Q7Z7B0 1213 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 FAM35AQ86V20 835 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 MAB21L3Q8N8X9 362 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 GPT2Q8TD30 523 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 TAF4BQ92750 862 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 TATDN2Q93075 761 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 FUBP3Q96I24 572 aaKnown RBP eCLIP10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 TNIP3Q96KP6 325 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 CEP63Q96MT8 703 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 ASB16Q96NS5 453 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 TWNKQ96RR1 684 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 ARID3AQ99856 593 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 B3GNT5Q9BYG0 378 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 IL21Q9HBE4 155 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 METTL14Q9HCE5 456 aaKnown RBP10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 ZFP14Q9HCL3 533 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 ABCB6Q9NP58 842 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 KRT82Q9NSB4 513 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 GDE1Q9NZC3 331 aa10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 ARIH1Q9Y4X5 557 aaPredicted RBP10.36□□□□□ -0.75
RTFDC1-205ENST00000466260 ATP8B3O60423 1300 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 TRIM66O15016 1216 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 TADA3O75528 432 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 ABL1P00519 1130 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 HMGA1P17096 107 aaKnown RBP10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 FCARP24071 287 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 GTF2H1P32780 548 aa10.35□□□□□ -0.75
RTFDC1-205ENST00000466260 FMO5P49326 533 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms