RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ZSCAN18Q8TBC5 510 aaPredicted RBP13.73□□□□□ -0.21
COL5A1-206ENST00000465877 SMARCD2Q92925 531 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 ELSPBP1Q96BH3 223 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 SMARCD1Q96GM5 515 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 CNOT6LQ96LI5 555 aaKnown RBP13.73□□□□□ -0.21
COL5A1-206ENST00000465877 ZSWIM3Q96MP5 696 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 MED15Q96RN5 788 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 TWNKQ96RR1 684 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 ARID3AQ99856 593 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 RPP25Q9BUL9 199 aaKnown RBP13.73□□□□□ -0.21
COL5A1-206ENST00000465877 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
COL5A1-206ENST00000465877 CYP3A43Q9HB55 503 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 KRT82Q9NSB4 513 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 TMEM30AQ9NV96 361 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 UXTQ9UBK9 157 aaPredicted RBP13.73□□□□□ -0.21
COL5A1-206ENST00000465877 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 ZDBF2Q9HCK1 2354 aa13.73□□□□□ -0.21
COL5A1-206ENST00000465877 F8VP50 259 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 CLDN5O00501 218 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 CILPO75339 1184 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 ECI2O75521 394 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 FGFR1OPO95684 399 aaKnown RBP13.72□□□□□ -0.21
COL5A1-206ENST00000465877 CCDC192P0DO97 292 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
COL5A1-206ENST00000465877 GRIK1P39086 918 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 NLRP12P59046 1061 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 GPR158Q5T848 1215 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 RBM43Q6ZSC3 357 aaKnown RBP13.72□□□□□ -0.21
COL5A1-206ENST00000465877 DENND5BQ6ZUT9 1274 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 TMEM150AQ86TG1 271 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 FAXDC2Q96IV6 333 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 SPATA17Q96L03 361 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 MED10Q9BTT4 135 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 NT5C1AQ9BXI3 368 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 B3GNT5Q9BYG0 378 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 GPR88Q9GZN0 384 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 FAM49BQ9NUQ9 324 aa13.72□□□□□ -0.21
COL5A1-206ENST00000465877 PDGFBP01127 241 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-206ENST00000465877 CFHP08603 1231 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 CUL2Q13617 745 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 TANGO2Q6ICL3 276 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 VITQ6UXI7 678 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 BMP8AQ7Z5Y6 402 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 FUKQ8N0W3 1084 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 C12orf29Q8N999 325 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 SLC2A14Q8TDB8 520 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 C8orf48Q96LL4 319 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 MYRFLQ96LU7 910 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 CEP295NLQ96MC4 621 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 TRPV4Q9HBA0 871 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 ZFP14Q9HCL3 533 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 DMAP1Q9NPF5 467 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-206ENST00000465877 SLC2A4RGQ9NR83 387 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 FBXL21Q9UKT6 434 aa13.71□□□□□ -0.21
COL5A1-206ENST00000465877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL5A1-206ENST00000465877 PMM2O15305 246 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 P4HA2O15460 535 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 PRAMEF12O95522 483 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 AFPP02771 609 aaKnown RBP13.7□□□□□ -0.22
COL5A1-206ENST00000465877 F11P03951 625 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 DDX6P26196 483 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL5A1-206ENST00000465877 USP46P62068 366 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 GRM2Q14416 872 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 TPD52L1Q16890 204 aaPredicted RBP13.7□□□□□ -0.22
COL5A1-206ENST00000465877 PAQR9Q6ZVX9 377 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 CRYBG2Q8N1P7 616 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 TTC39CQ8N584 583 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 WHAMMQ8TF30 809 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 MRPS31Q92665 395 aaKnown RBP13.7□□□□□ -0.22
COL5A1-206ENST00000465877 TATDN2Q93075 761 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 NT5C1BQ96P26 610 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 TTLL2Q9BWV7 592 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 PLA2G2FQ9BZM2 168 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 FAM124BQ9H5Z6 455 aaPredicted RBP13.7□□□□□ -0.22
COL5A1-206ENST00000465877 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 ARHGEF3Q9NR81 526 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 CISHQ9NSE2 258 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 ZMYM5Q9UJ78 669 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 CA14Q9ULX7 337 aa13.7□□□□□ -0.22
COL5A1-206ENST00000465877 KIAA1549LQ6ZVL6 1849 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 MYO15AQ9UKN7 3530 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 AP1G2O75843 785 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 TBXAS1P24557 533 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-206ENST00000465877 ADORA2BP29275 332 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 VIPR2P41587 438 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 CETN1Q12798 172 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 KCNH2Q12809 1159 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 IFRD2Q12894 506 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-206ENST00000465877 LRMPQ12912 555 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 ZNF394Q53GI3 561 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 CCDC183Q5T5S1 534 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 CWF19L1Q69YN2 538 aaKnown RBP13.69□□□□□ -0.22
COL5A1-206ENST00000465877 ARID3BQ8IVW6 561 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-206ENST00000465877 SUGP1Q8IWZ8 645 aaKnown RBP13.69□□□□□ -0.22
COL5A1-206ENST00000465877 SIX5Q8N196 739 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 FBXL6Q8N531 539 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 DEPDC1BQ8WUY9 529 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 PBXIP1Q96AQ6 731 aa13.69□□□□□ -0.22
COL5A1-206ENST00000465877 RSPRY1Q96DX4 576 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms