RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 LRPAP1P30533 357 aa6.43□□□□□ -1.38
SMC4-205ENST00000465563 ARHGAP25P42331 645 aa6.43□□□□□ -1.38
SMC4-205ENST00000465563 CCT4P50991 539 aaKnown RBP6.43□□□□□ -1.38
SMC4-205ENST00000465563 MIS18BP1Q6P0N0 1132 aa6.43□□□□□ -1.38
SMC4-205ENST00000465563 MTHFD1LQ6UB35 978 aa6.43□□□□□ -1.38
SMC4-205ENST00000465563 ZBTB46Q86UZ6 589 aa6.43□□□□□ -1.38
SMC4-205ENST00000465563 CHMP4CQ96CF2 233 aa6.43□□□□□ -1.38
SMC4-205ENST00000465563 MAP3K14Q99558 947 aa6.43□□□□□ -1.38
SMC4-205ENST00000465563 VPS16Q9H269 839 aa6.43□□□□□ -1.38
SMC4-205ENST00000465563 ELOVL5Q9NYP7 299 aa6.43□□□□□ -1.38
SMC4-205ENST00000465563 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMC4-205ENST00000465563 hCG_1984214I3L0E3 225 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 CYP2C9P11712 490 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 PDE6CP51160 858 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 DAZAP2Q15038 168 aaPredicted RBP6.42□□□□□ -1.38
SMC4-205ENST00000465563 CERKLQ49MI3 558 aaPredicted RBP6.42□□□□□ -1.38
SMC4-205ENST00000465563 KIRREL2Q6UWL6 708 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 SLC15A3Q8IY34 581 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 SOCS4Q8WXH5 440 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 RITA1Q96K30 269 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 NUP88Q99567 741 aaPredicted RBP6.42□□□□□ -1.38
SMC4-205ENST00000465563 SPRTNQ9H040 489 aaPredicted RBP6.42□□□□□ -1.38
SMC4-205ENST00000465563 PCDH12Q9NPG4 1184 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 PDGFCQ9NRA1 345 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 CNNM1Q9NRU3 951 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 GABRQQ9UN88 632 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 STXBP5LQ9Y2K9 1186 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 MRPS17Q9Y2R5 130 aaKnown RBP6.42□□□□□ -1.38
SMC4-205ENST00000465563 TMX2Q9Y320 296 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 COL4A3BPQ9Y5P4 624 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 WDR17Q8IZU2 1322 aa6.42□□□□□ -1.38
SMC4-205ENST00000465563 POC1B-GALNT4F8VUJ3 575 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 MYO1CO00159 1063 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 EXOC3O60645 756 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 PLCD1P51178 756 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 UCP3P55916 312 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 TRIP6Q15654 476 aaKnown RBP6.41□□□□□ -1.38
SMC4-205ENST00000465563 DEPDC1Q5TB30 811 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 PXDC1Q5TGL8 231 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 FCRL6Q6DN72 434 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 GALNT4Q8N4A0 578 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 CELF5Q8N6W0 485 aaKnown RBP6.41□□□□□ -1.38
SMC4-205ENST00000465563 TERB1Q8NA31 727 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 OSCP1Q8WVF1 389 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 HPS3Q969F9 1004 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 CAMKK2Q96RR4 588 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 THAP7Q9BT49 309 aaPredicted RBP6.41□□□□□ -1.38
SMC4-205ENST00000465563 ARMT1Q9H993 441 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 TCF7L1Q9HCS4 588 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 HOMER2Q9NSB8 354 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 MED16Q9Y2X0 877 aa6.41□□□□□ -1.38
SMC4-205ENST00000465563 PDE8BO95263 885 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 ALDH2P05091 517 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 PRKCBP05771 671 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 THP07101 528 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 CSF1RP07333 972 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 CHRM5P08912 532 aaPredicted RBP6.4□□□□□ -1.38
SMC4-205ENST00000465563 XRCC6P12956 609 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMC4-205ENST00000465563 MYO1EQ12965 1108 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 L1TD1Q5T7N2 865 aaKnown RBP6.4□□□□□ -1.38
SMC4-205ENST00000465563 GRAMD1CQ8IYS0 662 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 HMCESQ96FZ2 354 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 SNX18Q96RF0 628 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 CGRRF1Q99675 332 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 TMEM79Q9BSE2 394 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 DPCDQ9BVM2 203 aaPredicted RBP6.4□□□□□ -1.38
SMC4-205ENST00000465563 CXorf36Q9H7Y0 433 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 CPA4Q9UI42 421 aa6.4□□□□□ -1.38
SMC4-205ENST00000465563 FNDC1Q4ZHG4 1894 aaPredicted RBP6.4□□□□□ -1.39
SMC4-205ENST00000465563 UBE2Q2LH0YL09 131 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 BCAR3O75815 825 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 USP1O94782 785 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 SLC11A2P49281 568 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 WNT3P56703 355 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 LAMB3Q13751 1172 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 RABEP1Q15276 862 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 BRDTQ58F21 947 aaPredicted RBP6.39□□□□□ -1.39
SMC4-205ENST00000465563 SERPINA13PQ6UXR4 307 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 ZNF280BQ86YH2 543 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 PRSS3P2Q8NHM4 247 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 C1GALT1C1Q96EU7 318 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 LENG8Q96PV6 779 aaPredicted RBP6.39□□□□□ -1.39
SMC4-205ENST00000465563 KRTAP1-5Q9BYS1 174 aa6.39□□□□□ -1.39
SMC4-205ENST00000465563 TRMT13Q9NUP7 481 aaKnown RBP6.39□□□□□ -1.39
SMC4-205ENST00000465563 ADORA2AP29274 412 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 NR4A2P43354 598 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 KRT17Q04695 432 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 MGAT5BQ3V5L5 792 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 ATAT1Q5SQI0 421 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 AWAT2Q6E213 333 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 TECPR1Q7Z6L1 1165 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 KRT73Q86Y46 540 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 PLBD2Q8NHP8 589 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 MESP1Q9BRJ9 268 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 CIPCQ9C0C6 399 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 PIH1D1Q9NWS0 290 aaKnown RBP6.38□□□□□ -1.39
SMC4-205ENST00000465563 TFCP2L1Q9NZI6 479 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 ANKRD6Q9Y2G4 727 aa6.38□□□□□ -1.39
SMC4-205ENST00000465563 TRIM38O00635 465 aa6.37□□□□□ -1.39
SMC4-205ENST00000465563 CYP2A6P11509 494 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms