RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CDH7Q9ULB5 785 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 MRPS23Q9Y3D9 190 aaKnown RBP21.6■■□□□ 1.05
SKA3-205ENST00000465471 ZFP37Q9Y6Q3 630 aaPredicted RBP21.6■■□□□ 1.05
SKA3-205ENST00000465471 DENND4CQ5VZ89 1909 aa21.6■■□□□ 1.05
SKA3-205ENST00000465471 ATP8B3O60423 1300 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 ZNF197O14709 1029 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 TRIM66O15016 1216 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 CSH1P0DML2 217 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 CSH2P0DML3 217 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 CCDC130P13994 396 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 CEBPBP17676 345 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 SLC9A1P19634 815 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 PON1P27169 355 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 ZNF165P49910 485 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 IQCB1Q15051 598 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 CYP4A22Q5TCH4 519 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 SDHAF4Q5VUM1 108 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 POTEHQ6S545 545 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 APTXQ7Z2E3 356 aaKnown RBP21.59■■□□□ 1.05
SKA3-205ENST00000465471 SLC2A14Q8TDB8 520 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 JAKMIP2Q96AA8 810 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 TRMT2BQ96GJ1 504 aaKnown RBP21.59■■□□□ 1.05
SKA3-205ENST00000465471 SMARCD1Q96GM5 515 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 TMEM176AQ96HP8 235 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 MYRFLQ96LU7 910 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 HNRNPABQ99729 332 aaKnown RBP21.59■■□□□ 1.05
SKA3-205ENST00000465471 SIX2Q9NPC8 291 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 FAM49BQ9NUQ9 324 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 TAB2Q9NYJ8 693 aa21.59■■□□□ 1.05
SKA3-205ENST00000465471 LRRC10BA6NIK2 292 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 SLC38A8A6NNN8 435 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 F8VP50 259 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 FGF19O95750 216 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 LAMP2P13473 410 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 TRIM21P19474 475 aaKnown RBP21.58■■□□□ 1.05
SKA3-205ENST00000465471 GBP2P32456 591 aaPredicted RBP21.58■■□□□ 1.05
SKA3-205ENST00000465471 SSTR3P32745 418 aaPredicted RBP21.58■■□□□ 1.05
SKA3-205ENST00000465471 GRIK1P39086 918 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 ZNF394Q53GI3 561 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 GAREM2Q75VX8 874 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 RRAGAQ7L523 313 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 SCN4BQ8IWT1 228 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 STKLD1Q8NE28 680 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 SHKBP1Q8TBC3 707 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 FAM200AQ8TCP9 573 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 DNAI2Q9GZS0 605 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 CSNK1G1Q9HCP0 422 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 APEX2Q9UBZ4 518 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 CNTN6Q9UQ52 1028 aa21.58■■□□□ 1.05
SKA3-205ENST00000465471 MYL4P12829 197 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 ZNF132P52740 706 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 APBA1Q02410 837 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 KCNMA1Q12791 1236 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 MTMR3Q13615 1198 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 ARHGAP17Q68EM7 881 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 SMYD5Q6GMV2 418 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 TMEM150AQ86TG1 271 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 RNF135Q8IUD6 432 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 ZMIZ2Q8NF64 920 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 ING5Q8WYH8 240 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 CYFIP2Q96F07 1278 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 FAM81BQ96LP2 452 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 SMOQ99835 787 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 TTLL2Q9BWV7 592 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 KRT82Q9NSB4 513 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 GDE1Q9NZC3 331 aa21.57■■□□□ 1.04
SKA3-205ENST00000465471 ZNF638Q14966 1978 aaKnown RBP21.57■■□□□ 1.04
SKA3-205ENST00000465471 SMTNL1A8MU46 457 aa21.56■■□□□ 1.04
SKA3-205ENST00000465471 COPB1P53618 953 aaKnown RBP21.56■■□□□ 1.04
SKA3-205ENST00000465471 PPP1R26Q5T8A7 1209 aaPredicted RBP21.56■■□□□ 1.04
SKA3-205ENST00000465471 ENOSF1Q7L5Y1 443 aa21.56■■□□□ 1.04
SKA3-205ENST00000465471 MED10Q9BTT4 135 aa21.56■■□□□ 1.04
SKA3-205ENST00000465471 DMAP1Q9NPF5 467 aaPredicted RBP21.56■■□□□ 1.04
SKA3-205ENST00000465471 A0A1W2PRU2 124 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 ANHXE9PGG2 379 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 TNFRSF10BO14763 440 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 TADA3O75528 432 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 AP1G2O75843 785 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 CAVIN2O95810 425 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 F11P03951 625 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 PAEPP09466 180 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 ATP1A3P13637 1013 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 ANXA13P27216 316 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 GABRR2P28476 465 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 CDC25CP30307 473 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 GJB7Q6PEY0 223 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 TMEM270Q6UE05 265 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 CLEC20AQ6ZU45 233 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 DENND5BQ6ZUT9 1274 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 HEXIM2Q96MH2 286 aaKnown RBP21.55■■□□□ 1.04
SKA3-205ENST00000465471 KCNK16Q96T55 309 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 VPS16Q9H269 839 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 CBX8Q9HC52 389 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 UBE2TQ9NPD8 197 aaPredicted RBP21.55■■□□□ 1.04
SKA3-205ENST00000465471 PCDHB4Q9Y5E5 795 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 MYH10P35580 1976 aa21.55■■□□□ 1.04
SKA3-205ENST00000465471 NUP210Q8TEM1 1887 aaPredicted RBP21.54■■□□□ 1.04
SKA3-205ENST00000465471 RNF225M0QZC1 329 aaPredicted RBP21.54■■□□□ 1.04
SKA3-205ENST00000465471 TNFRSF10AO00220 468 aa21.54■■□□□ 1.04
SKA3-205ENST00000465471 BEST1O76090 585 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms