RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ITPKBP27987 946 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 CCT6AP40227 531 aaKnown RBP16.16■□□□□ 0.18
HDAC6-214ENST00000465269 KDSRQ06136 332 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 ZNF33AQ06730 810 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 RAD51AP2Q09MP3 1159 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 ENOX2Q16206 610 aaKnown RBP16.16■□□□□ 0.18
HDAC6-214ENST00000465269 CEP76Q8TAP6 659 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 UBL7Q96S82 380 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-214ENST00000465269 CD93Q9NPY3 652 aa16.16■□□□□ 0.18
HDAC6-214ENST00000465269 E9PMD0 336 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 PRPF40AO75400 957 aaKnown RBP16.15■□□□□ 0.18
HDAC6-214ENST00000465269 CYP17A1P05093 508 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 CYP3A5P20815 502 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 WASP42768 502 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 MRPS21P82921 87 aaKnown RBP16.15■□□□□ 0.18
HDAC6-214ENST00000465269 PPP2R3AQ06190 1150 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 NR1H3Q13133 447 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 SAFBQ15424 915 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDAC6-214ENST00000465269 C9orf57Q5W0N0 161 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 WSCD1Q658N2 575 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 DIS3L2Q8IYB7 885 aaKnown RBP16.15■□□□□ 0.18
HDAC6-214ENST00000465269 ERMNQ8TAM6 284 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 HSPA12BQ96MM6 686 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 PNMA5Q96PV4 448 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 DDX19AQ9NUU7 478 aaKnown RBP16.15■□□□□ 0.18
HDAC6-214ENST00000465269 ZMYM5Q9UJ78 669 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 RAI2Q9Y5P3 530 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 CYP46A1Q9Y6A2 500 aa16.15■□□□□ 0.18
HDAC6-214ENST00000465269 TRAV19A0A0A6YYK7 116 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 CLDN3O15551 220 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 AP5Z1O43299 807 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 CBFA2T3O75081 653 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 CDKL5O76039 1030 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 CYP11A1P05108 521 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 NFICP08651 508 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 CLTAP09496 248 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 USP17L7P0C7H9 530 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 ATXN1LP0C7T5 689 aaKnown RBP16.14■□□□□ 0.17
HDAC6-214ENST00000465269 MAOBP27338 520 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 HOXD12P35452 270 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 MCL1Q07820 350 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 HNRNPDQ14103 355 aaKnown RBP16.14■□□□□ 0.17
HDAC6-214ENST00000465269 ZNF174Q15697 407 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 PLEKHG6Q3KR16 790 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 LMBRD2Q68DH5 695 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-214ENST00000465269 JADE1Q6IE81 842 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 ZNF605Q86T29 641 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 ZNF843Q8N446 348 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 TRIML1Q8N9V2 468 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 SPPL2BQ8TCT7 592 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 PYM1Q9BRP8 204 aaKnown RBP16.14■□□□□ 0.17
HDAC6-214ENST00000465269 PLEKHA5Q9HAU0 1116 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 IL21RQ9HBE5 538 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 GCNT4Q9P109 453 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 CALCOCO1Q9P1Z2 691 aa16.14■□□□□ 0.17
HDAC6-214ENST00000465269 APOBEC2Q9Y235 224 aaKnown RBP16.14■□□□□ 0.17
HDAC6-214ENST00000465269 A0A087WV48 116 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 CYB561D2O14569 222 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 NFATC1O95644 943 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 GABRG2P18507 467 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 CYP2F1P24903 491 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 KIR2DL1P43626 348 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-214ENST00000465269 SPDYCQ5MJ68 293 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 SPATA1Q5VX52 437 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 TMPRSS7Q7RTY8 843 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 CCDC26Q8TAB7 109 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 SETD7Q8WTS6 366 aaKnown RBP16.13■□□□□ 0.17
HDAC6-214ENST00000465269 PRDM16Q9HAZ2 1276 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 BRMS1Q9HCU9 246 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 TOR4AQ9NXH8 423 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 PCOLCE2Q9UKZ9 415 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 CYP8B1Q9UNU6 501 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 PCDHB5Q9Y5E4 795 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 STK24Q9Y6E0 443 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 ANAPC1Q9H1A4 1944 aa16.13■□□□□ 0.17
HDAC6-214ENST00000465269 IGHV1OR15-9A0A0B4J2B8 117 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 PIRO00625 290 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 KAT7O95251 611 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 SYPP08247 313 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 OR52Z1P0C646 297 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 CSH1P0DML2 217 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 CSH2P0DML3 217 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 MAPTP10636 758 aaKnown RBP16.12■□□□□ 0.17
HDAC6-214ENST00000465269 DPP6P42658 865 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 ABCG1P45844 678 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 GRIK2Q13002 908 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 STRN3Q13033 797 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 KCNK18Q7Z418 384 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 FILIP1Q7Z7B0 1213 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 RGL4Q8IZJ4 473 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 NECAB1Q8N987 351 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 TMEM161BQ8NDZ6 487 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 SLC6A17Q9H1V8 727 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 TMEM206Q9H813 350 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 PDRG1Q9NUG6 133 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
HDAC6-214ENST00000465269 PTPN13Q12923 2485 aa16.12■□□□□ 0.17
HDAC6-214ENST00000465269 PP2D1A8MPX8 630 aa16.11■□□□□ 0.17
HDAC6-214ENST00000465269 ATXN7O15265 892 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-214ENST00000465269 HCRTO43612 131 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms