RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 RPN1P04843 607 aaKnown RBP5.09□□□□□ -1.59
VPS8-217ENST00000465213 NEK3P51956 506 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 ZNF135P52742 658 aaPredicted RBP5.09□□□□□ -1.59
VPS8-217ENST00000465213 TERF1P54274 439 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 EIF5P55010 431 aaKnown RBP5.09□□□□□ -1.59
VPS8-217ENST00000465213 TAP2Q03519 686 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 BIRC3Q13489 604 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 PLS1Q14651 629 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 HLXQ14774 488 aaPredicted RBP5.09□□□□□ -1.59
VPS8-217ENST00000465213 GLIPR1L2Q4G1C9 344 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 IFIT1BQ5T764 474 aaKnown RBP5.09□□□□□ -1.59
VPS8-217ENST00000465213 KIAA0895LQ68EN5 471 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 SLC30A10Q6XR72 485 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 ARHGEF25Q86VW2 580 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 TTC30BQ8N4P2 665 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 LPIN2Q92539 896 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 SNX19Q92543 992 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 GJA10Q969M2 543 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 TTC17Q96AE7 1141 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 C1GALT1C1Q96EU7 318 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 CDK5RAP3Q96JB5 506 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 PLCB1Q9NQ66 1216 aa5.09□□□□□ -1.59
VPS8-217ENST00000465213 C9orf78Q9NZ63 289 aaPredicted RBP5.09□□□□□ -1.59
VPS8-217ENST00000465213 FEZ2Q9UHY8 353 aaPredicted RBP5.09□□□□□ -1.59
VPS8-217ENST00000465213 NOB1Q9ULX3 412 aaKnown RBP5.09□□□□□ -1.59
VPS8-217ENST00000465213 VSTM5A8MXK1 200 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 H3BUI4 141 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 GOLIM4O00461 696 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 YY2O15391 372 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 FIBPO43427 364 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 PEX1O43933 1283 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 OFD1O75665 1012 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 KIF20AO95235 890 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 FOLR3P41439 243 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 TOB1P50616 345 aaPredicted RBP5.08□□□□□ -1.6
VPS8-217ENST00000465213 HNRNPMP52272 730 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS8-217ENST00000465213 TBX2Q13207 712 aaPredicted RBP5.08□□□□□ -1.6
VPS8-217ENST00000465213 SAFBQ15424 915 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS8-217ENST00000465213 LONRF1Q17RB8 773 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 MINDY4Q4G0A6 757 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 JAKMIP3Q5VZ66 844 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 TAF2Q6P1X5 1199 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 MZT2AQ6P582 158 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 B3GNT9Q6UX72 402 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 PPP1R32Q7Z5V6 425 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 USP37Q86T82 979 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 TPH2Q8IWU9 490 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 PLBD2Q8NHP8 589 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 ACTRT2Q8TDY3 377 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 DIS3LQ8TF46 1054 aaKnown RBP5.08□□□□□ -1.6
VPS8-217ENST00000465213 SLC35A4Q96G79 324 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 TBATAQ96M53 351 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 SERINC2Q96SA4 455 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 CGRRF1Q99675 332 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 CNPPD1Q9BV87 410 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 TINAGL1Q9GZM7 467 aaPredicted RBP5.08□□□□□ -1.6
VPS8-217ENST00000465213 KLK15Q9H2R5 256 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 SMOC2Q9H3U7 446 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.08□□□□□ -1.6
VPS8-217ENST00000465213 ARPP21Q9UBL0 812 aaPredicted RBP5.08□□□□□ -1.6
VPS8-217ENST00000465213 HDAC9Q9UKV0 1011 aa5.08□□□□□ -1.6
VPS8-217ENST00000465213 FAM200BP0CF97 657 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 HDCP19113 662 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 NPTX2P47972 431 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 EXOSC9Q06265 439 aaKnown RBP5.07□□□□□ -1.6
VPS8-217ENST00000465213 GBX1Q14549 363 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 PREPLQ4J6C6 727 aaPredicted RBP5.07□□□□□ -1.6
VPS8-217ENST00000465213 CCDC92Q53HC0 331 aaPredicted RBP5.07□□□□□ -1.6
VPS8-217ENST00000465213 CCDC157Q569K6 752 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 C1QTNF12Q5T7M4 302 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 CFAP161Q6P656 301 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 PSD4Q8NDX1 1056 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 AIFM3Q96NN9 605 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 ALDH8A1Q9H2A2 487 aaPredicted RBP5.07□□□□□ -1.6
VPS8-217ENST00000465213 RNF7Q9UBF6 113 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 STXBP5LQ9Y2K9 1186 aa5.07□□□□□ -1.6
VPS8-217ENST00000465213 SPATA31A3Q5VYP0 1347 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 FAM170AA1A519 330 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 ERC2O15083 957 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 PRPF3O43395 683 aaKnown RBP5.06□□□□□ -1.6
VPS8-217ENST00000465213 PIP5K1CO60331 668 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 VPS4BO75351 444 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 PPP3CBP16298 524 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 RRM1P23921 792 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 ABCG1P45844 678 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 PROK1P58294 105 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 CHAF1AQ13111 956 aaPredicted RBP5.06□□□□□ -1.6
VPS8-217ENST00000465213 BOP1Q14137 746 aaKnown RBP5.06□□□□□ -1.6
VPS8-217ENST00000465213 EMC10Q5UCC4 262 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 MZT2BQ6NZ67 158 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 EPM2AIP1Q7L775 607 aaPredicted RBP5.06□□□□□ -1.6
VPS8-217ENST00000465213 CELF5Q8N6W0 485 aaKnown RBP5.06□□□□□ -1.6
VPS8-217ENST00000465213 C9orf106Q8NAJ2 232 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 TOR1AIP2Q8NFQ8 470 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 KLHDC4Q8TBB5 520 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 SLC35G2Q8TBE7 412 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 MYCBPAPQ8TBZ2 947 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 LRGUKQ96M69 825 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 UROC1Q96N76 676 aa5.06□□□□□ -1.6
VPS8-217ENST00000465213 TIMP4Q99727 224 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms