RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 AKR1B15C9JRZ8 316 aaPredicted RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 H3BQF6 201 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 CHMP2AO43633 222 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 IPO7O95373 1038 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 LARGE1O95461 756 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 C22orf31O95567 290 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 GLP2RO95838 553 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 GOLGA6DP0CG33 693 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 STAG3L1P0CL83 205 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 FGFR1P11362 822 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 JUNBP17275 347 aaPredicted RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 HNRNPH1P31943 449 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 AARSP49588 968 aaKnown RBP eCLIP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 SARSP49591 514 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 NDUFV1P49821 464 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 CLCN3P51790 818 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 CCT2P78371 535 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 AKAP17AQ02040 695 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 LMNB2Q03252 620 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 CEBPZQ03701 1054 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 STK3Q13188 491 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 TRIM14Q14142 442 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 SMAD2Q15796 467 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 PRR16Q569H4 304 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 BEND6Q5SZJ8 279 aaPredicted RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 SPOUT1Q5T280 376 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 FAM102BQ5T8I3 360 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 PRAMEF13Q5VWM6 474 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 AP1ARQ63HQ0 302 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 SPECC1LQ69YQ0 1117 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 MIS18BP1Q6P0N0 1132 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 WDR93Q6P2C0 686 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 TRIM65Q6PJ69 517 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 C22orf34Q6ZV56 151 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 RBM23Q86U06 439 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 TAX1BP1Q86VP1 789 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 FAM228AQ86W67 206 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 MRPL41Q8IXM3 137 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 KIAA0319LQ8IZA0 1049 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 REXO1Q8N1G1 1221 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 LRRC71Q8N4P6 559 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 METTL13Q8N6R0 699 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 RIN3Q8TB24 985 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 SPPL3Q8TCT6 385 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 POF1BQ8WVV4 589 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 WASF1Q92558 559 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 P2RX5Q93086 422 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 DHX58Q96C10 678 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 ZNF274Q96GC6 653 aaPredicted RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 ADAM2Q99965 735 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 JPH2Q9BR39 696 aaPredicted RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 RSRP1Q9BUV0 290 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 SLC26A6Q9BXS9 759 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 CAPS2Q9BXY5 557 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 RNF26Q9BY78 433 aaPredicted RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 TRIM6Q9C030 488 aaPredicted RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 ZMYND12Q9H0C1 365 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 NCOA5Q9HCD5 579 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 C6orf50Q9HD87 102 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 BATF3Q9NR55 127 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 SPATS2LQ9NUQ6 558 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 GOLGA6AQ9NYA3 693 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 VPS54Q9P1Q0 977 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 CPSF2Q9P2I0 782 aaKnown RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 GABBR1Q9UBS5 961 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 TJP2Q9UDY2 1190 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 TCEAL9Q9UHQ7 104 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 ODF2LQ9ULJ1 636 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 BARX2Q9UMQ3 279 aaPredicted RBP6.11□□□□□ -1.43
CMTM1-207ENST00000465057 ST3GAL5Q9UNP4 418 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 FAM50BQ9Y247 325 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 DENND4AQ7Z401 1863 aa6.11□□□□□ -1.43
CMTM1-207ENST00000465057 GOLGA6L10A0A0M3HER8 536 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 TARSL2A2RTX5 802 aaKnown RBP6.1□□□□□ -1.43
CMTM1-207ENST00000465057 DENND3A2RUS2 1198 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 VWA3AA6NCI4 1184 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 PRR33A8MZF0 331 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 PER2O15055 1255 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 MAGEB2O15479 319 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 PRPF3O43395 683 aaKnown RBP6.1□□□□□ -1.43
CMTM1-207ENST00000465057 DCXO43602 365 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 EDIL3O43854 480 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 HSF2BPO75031 334 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 NEBLO76041 1014 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 PGRP06401 933 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 RNASE1P07998 156 aaKnown RBP6.1□□□□□ -1.43
CMTM1-207ENST00000465057 NEFHP12036 1026 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 FGFR4P22455 802 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 GBP2P32456 591 aaPredicted RBP6.1□□□□□ -1.43
CMTM1-207ENST00000465057 CIITAP33076 1130 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 PBX3P40426 434 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 NRIP1P48552 1158 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 CCT5P48643 541 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 CLCN7P51798 805 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 ADAM15Q13444 863 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 SMAD4Q13485 552 aaKnown RBP6.1□□□□□ -1.43
CMTM1-207ENST00000465057 CAMK2GQ13555 558 aaPredicted RBP6.1□□□□□ -1.43
CMTM1-207ENST00000465057 PPP2R5AQ15172 486 aa6.1□□□□□ -1.43
CMTM1-207ENST00000465057 RBBP5Q15291 538 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms