RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CMTM8Q8IZV2 173 aa10.25□□□□□ -0.77
APP-213ENST00000464867 PHTF2Q8N3S3 785 aa10.25□□□□□ -0.77
APP-213ENST00000464867 CCDC33Q8N5R6 958 aa10.25□□□□□ -0.77
APP-213ENST00000464867 TBCKQ8TEA7 893 aa10.25□□□□□ -0.77
APP-213ENST00000464867 USP33Q8TEY7 942 aa10.25□□□□□ -0.77
APP-213ENST00000464867 CDC6Q99741 560 aa10.25□□□□□ -0.77
APP-213ENST00000464867 KIF9Q9HAQ2 790 aa10.25□□□□□ -0.77
APP-213ENST00000464867 TOPORSQ9NS56 1045 aaPredicted RBP10.25□□□□□ -0.77
APP-213ENST00000464867 NAP1L2Q9ULW6 460 aaPredicted RBP10.25□□□□□ -0.77
APP-213ENST00000464867 MMP17Q9ULZ9 603 aa10.25□□□□□ -0.77
APP-213ENST00000464867 RBM8AQ9Y5S9 174 aaKnown RBP10.25□□□□□ -0.77
APP-213ENST00000464867 PLXND1Q9Y4D7 1925 aa10.25□□□□□ -0.77
APP-213ENST00000464867 PCDH15Q96QU1 1955 aa10.25□□□□□ -0.77
APP-213ENST00000464867 CYP3A7-CYP3A51PA0A087WV96 503 aa10.24□□□□□ -0.77
APP-213ENST00000464867 SMIM28A0A1B0GU29 152 aa10.24□□□□□ -0.77
APP-213ENST00000464867 A0A1W2PQD8 194 aa10.24□□□□□ -0.77
APP-213ENST00000464867 B8ZZF3 427 aa10.24□□□□□ -0.77
APP-213ENST00000464867 TDP2O95551 362 aa10.24□□□□□ -0.77
APP-213ENST00000464867 ARSAP15289 507 aa10.24□□□□□ -0.77
APP-213ENST00000464867 GNSP15586 552 aa10.24□□□□□ -0.77
APP-213ENST00000464867 CYP3A7P24462 503 aa10.24□□□□□ -0.77
APP-213ENST00000464867 RPL9P32969 192 aaKnown RBP10.24□□□□□ -0.77
APP-213ENST00000464867 EIF2S3P41091 472 aaKnown RBP10.24□□□□□ -0.77
APP-213ENST00000464867 CYP4F8P98187 520 aa10.24□□□□□ -0.77
APP-213ENST00000464867 YWHAHQ04917 246 aaPredicted RBP10.24□□□□□ -0.77
APP-213ENST00000464867 ZNF33AQ06730 810 aa10.24□□□□□ -0.77
APP-213ENST00000464867 FAM187BQ17R55 369 aa10.24□□□□□ -0.77
APP-213ENST00000464867 TRIM22Q8IYM9 498 aa10.24□□□□□ -0.77
APP-213ENST00000464867 ETNPPLQ8TBG4 499 aa10.24□□□□□ -0.77
APP-213ENST00000464867 ATP2A3Q93084 1043 aa10.24□□□□□ -0.77
APP-213ENST00000464867 SLC46A2Q9BY10 475 aa10.24□□□□□ -0.77
APP-213ENST00000464867 ZDHHC5Q9C0B5 715 aa10.24□□□□□ -0.77
APP-213ENST00000464867 POLR3FQ9H1D9 316 aaPredicted RBP10.24□□□□□ -0.77
APP-213ENST00000464867 DNAJC25Q9H1X3 360 aa10.24□□□□□ -0.77
APP-213ENST00000464867 C2orf40Q9H1Z8 148 aa10.24□□□□□ -0.77
APP-213ENST00000464867 FAM124BQ9H5Z6 455 aaPredicted RBP10.24□□□□□ -0.77
APP-213ENST00000464867 ECT2Q9H8V3 914 aa10.24□□□□□ -0.77
APP-213ENST00000464867 GDPD2Q9HCC8 539 aa10.24□□□□□ -0.77
APP-213ENST00000464867 XPNPEP1Q9NQW7 623 aa10.24□□□□□ -0.77
APP-213ENST00000464867 TDP1Q9NUW8 608 aa10.24□□□□□ -0.77
APP-213ENST00000464867 SUSD2Q9UGT4 822 aa10.24□□□□□ -0.77
APP-213ENST00000464867 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
APP-213ENST00000464867 PCOLCE2Q9UKZ9 415 aa10.24□□□□□ -0.77
APP-213ENST00000464867 DYRK1BQ9Y463 629 aa10.24□□□□□ -0.77
APP-213ENST00000464867 SPTAN1Q13813 2472 aaKnown RBP10.23□□□□□ -0.77
APP-213ENST00000464867 LIG1P18858 919 aa10.23□□□□□ -0.77
APP-213ENST00000464867 IFNAR2P48551 515 aa10.23□□□□□ -0.77
APP-213ENST00000464867 MRPS21P82921 87 aaKnown RBP10.23□□□□□ -0.77
APP-213ENST00000464867 VAC14Q08AM6 782 aa10.23□□□□□ -0.77
APP-213ENST00000464867 EPHA7Q15375 998 aa10.23□□□□□ -0.77
APP-213ENST00000464867 RIPOR1Q6ZS17 1223 aa10.23□□□□□ -0.77
APP-213ENST00000464867 USP37Q86T82 979 aa10.23□□□□□ -0.77
APP-213ENST00000464867 TPH2Q8IWU9 490 aa10.23□□□□□ -0.77
APP-213ENST00000464867 RGL4Q8IZJ4 473 aa10.23□□□□□ -0.77
APP-213ENST00000464867 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
APP-213ENST00000464867 FRMD1Q8N878 549 aa10.23□□□□□ -0.77
APP-213ENST00000464867 BEST2Q8NFU1 509 aa10.23□□□□□ -0.77
APP-213ENST00000464867 HMGB4Q8WW32 186 aa10.23□□□□□ -0.77
APP-213ENST00000464867 NXPE2Q96DL1 559 aa10.23□□□□□ -0.77
APP-213ENST00000464867 SUSD3Q96L08 255 aa10.23□□□□□ -0.77
APP-213ENST00000464867 FAM20AQ96MK3 541 aa10.23□□□□□ -0.77
APP-213ENST00000464867 CCDC94Q9BW85 323 aaPredicted RBP10.23□□□□□ -0.77
APP-213ENST00000464867 FZD8Q9H461 694 aa10.23□□□□□ -0.77
APP-213ENST00000464867 DUS2Q9NX74 493 aaKnown RBP10.23□□□□□ -0.77
APP-213ENST00000464867 WRAP73Q9P2S5 460 aaPredicted RBP10.23□□□□□ -0.77
APP-213ENST00000464867 HRH3Q9Y5N1 445 aa10.23□□□□□ -0.77
APP-213ENST00000464867 TEP1Q99973 2627 aaKnown RBP10.23□□□□□ -0.77
APP-213ENST00000464867 TSC2P49815 1807 aa10.23□□□□□ -0.77
APP-213ENST00000464867 OR6C75A6NL08 312 aa10.22□□□□□ -0.77
APP-213ENST00000464867 PYCARD-AS1I3L0S3 204 aa10.22□□□□□ -0.77
APP-213ENST00000464867 ZBTB39O15060 712 aa10.22□□□□□ -0.77
APP-213ENST00000464867 EDIL3O43854 480 aa10.22□□□□□ -0.77
APP-213ENST00000464867 SLC28A2O43868 658 aa10.22□□□□□ -0.77
APP-213ENST00000464867 GJB3O75712 270 aa10.22□□□□□ -0.77
APP-213ENST00000464867 DDX6P26196 483 aaKnown RBP eCLIP10.22□□□□□ -0.77
APP-213ENST00000464867 TUFMP49411 452 aaKnown RBP10.22□□□□□ -0.77
APP-213ENST00000464867 NLRP5P59047 1200 aa10.22□□□□□ -0.77
APP-213ENST00000464867 GPR17Q13304 367 aa10.22□□□□□ -0.77
APP-213ENST00000464867 CTTNQ14247 550 aaKnown RBP10.22□□□□□ -0.77
APP-213ENST00000464867 MAP7D1Q3KQU3 841 aa10.22□□□□□ -0.77
APP-213ENST00000464867 PREPLQ4J6C6 727 aaPredicted RBP10.22□□□□□ -0.77
APP-213ENST00000464867 EOGTQ5NDL2 527 aa10.22□□□□□ -0.77
APP-213ENST00000464867 SYCP2LQ5T4T6 812 aa10.22□□□□□ -0.77
APP-213ENST00000464867 NAIF1Q69YI7 327 aaPredicted RBP10.22□□□□□ -0.77
APP-213ENST00000464867 CENPPQ6IPU0 288 aa10.22□□□□□ -0.77
APP-213ENST00000464867 ARMCX5Q6P1M9 558 aa10.22□□□□□ -0.77
APP-213ENST00000464867 MOXD1Q6UVY6 613 aa10.22□□□□□ -0.77
APP-213ENST00000464867 DEFB119Q8N690 84 aa10.22□□□□□ -0.77
APP-213ENST00000464867 MAB21L3Q8N8X9 362 aa10.22□□□□□ -0.77
APP-213ENST00000464867 TTC16Q8NEE8 873 aa10.22□□□□□ -0.77
APP-213ENST00000464867 ENGASEQ8NFI3 743 aa10.22□□□□□ -0.77
APP-213ENST00000464867 EZH1Q92800 747 aaPredicted RBP10.22□□□□□ -0.77
APP-213ENST00000464867 USP13Q92995 863 aaPredicted RBP10.22□□□□□ -0.77
APP-213ENST00000464867 WBP1Q96G27 269 aa10.22□□□□□ -0.77
APP-213ENST00000464867 ESYT1Q9BSJ8 1104 aa10.22□□□□□ -0.77
APP-213ENST00000464867 PRDM16Q9HAZ2 1276 aa10.22□□□□□ -0.77
APP-213ENST00000464867 RGL1Q9NZL6 768 aa10.22□□□□□ -0.77
APP-213ENST00000464867 VAV3Q9UKW4 847 aa10.22□□□□□ -0.77
APP-213ENST00000464867 CCL26Q9Y258 94 aa10.22□□□□□ -0.77
APP-213ENST00000464867 FAM149AA5PLN7 773 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms