RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PENKP01210 267 aaPredicted RBP7.64□□□□□ -1.19
USP48-206ENST00000464577 HLA-DRAP01903 254 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 CALB1P05937 261 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 UBTFL6P0CB48 400 aaPredicted RBP7.64□□□□□ -1.19
USP48-206ENST00000464577 BGNP21810 368 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 MMP8P22894 467 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 GNA15P30679 374 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 CACNB3P54284 484 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 PSMC5P62195 406 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 XIAPP98170 497 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 ZNF252P-AS1Q0IIN9 211 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 CDC16Q13042 620 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 PTK7Q13308 1070 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 CUL2Q13617 745 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 MSS51Q4VC12 460 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 ATP13A4Q4VNC1 1196 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 LIN52Q52LA3 116 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 BRDTQ58F21 947 aaPredicted RBP7.64□□□□□ -1.19
USP48-206ENST00000464577 FNBP1LQ5T0N5 605 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 ANKRD22Q5VYY1 191 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 RIPOR1Q6ZS17 1223 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 POLNQ7Z5Q5 900 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 TTC7BQ86TV6 843 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 FAM160B2Q86V87 743 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 IFNLR1Q8IU57 520 aaPredicted RBP7.64□□□□□ -1.19
USP48-206ENST00000464577 RHPN2Q8IUC4 686 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 PALM2Q8IXS6 379 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 ST13P4Q8IZP2 240 aaPredicted RBP7.64□□□□□ -1.19
USP48-206ENST00000464577 FAM81AQ8TBF8 368 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 RAB3IL1Q8TBN0 382 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 SLC44A1Q8WWI5 657 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 POMGNT1Q8WZA1 660 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 APBB2Q92870 758 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 FNBP1Q96RU3 617 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 TMEM121Q9BTD3 319 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 WWP1Q9H0M0 922 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 C1orf21Q9H246 121 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 KMT5AQ9NQR1 393 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 TBC1D22BQ9NU19 505 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 MKS1Q9NXB0 559 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 STK32BQ9NY57 414 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.64□□□□□ -1.19
USP48-206ENST00000464577 TMX2Q9Y320 296 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 IVNS1ABPQ9Y6Y0 642 aa7.64□□□□□ -1.19
USP48-206ENST00000464577 GOLGA8SH3BPF8 625 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 GOLGA8MH3BSY2 632 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 I3L4J1 428 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 GOLGA8RI6L899 631 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 BUD23O43709 281 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 EXTL3O43909 919 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 LSM8O95777 96 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 IFNB1P01574 187 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 C4BPAP04003 597 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 CFHP08603 1231 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 GYS1P13807 737 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TCF4P15884 667 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TBXAS1P24557 533 aaPredicted RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 ABCD1P33897 745 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 JAK3P52333 1124 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 RTP1P59025 263 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 GHRHRQ02643 423 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 SPP2Q13103 211 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 LSAMPQ13449 338 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 PIGHQ14442 188 aaPredicted RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 FAM98CQ17RN3 349 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 DOK7Q18PE1 504 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TKFCQ3LXA3 575 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ZFYVE27Q5T4F4 411 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 FAM196AQ6ZSG2 479 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 BBS12Q6ZW61 710 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 MARK2Q7KZI7 788 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 PASD1Q8IV76 773 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ULK2Q8IYT8 1036 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 PDIK1LQ8N165 341 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 RBM15BQ8NDT2 890 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 ZNF516Q92618 1163 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ITFG2Q969R8 447 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TTC17Q96AE7 1141 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ELMO3Q96BJ8 720 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 SERAC1Q96JX3 654 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 FAM111AQ96PZ2 611 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 PANX3Q96QZ0 392 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TUBGCP5Q96RT8 1024 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 ADAM33Q9BZ11 813 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 PNPLA8Q9NP80 782 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 SORCS3Q9UPU3 1222 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 SSX2IPQ9Y2D8 614 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 PCDHB4Q9Y5E5 795 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 FAM237BA0A1B0GVD1 139 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 C3orf70A6NLC5 250 aaPredicted RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 H0YCG3 227 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 H3BRJ5 948 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 CREB3O43889 395 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 TMEM63AO94886 807 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 PABPC4LP0CB38 370 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 SFNP31947 248 aa7.63□□□□□ -1.19
USP48-206ENST00000464577 STIP1P31948 543 aaKnown RBP7.63□□□□□ -1.19
USP48-206ENST00000464577 RPL22P35268 128 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms