RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 RPS6KL1Q9Y6S9 549 aa9.46□□□□□ -0.89
HPS4-208ENST00000464362 PRRC2BQ5JSZ5 2229 aaKnown RBP9.46□□□□□ -0.9
HPS4-208ENST00000464362 RGPD8O14715 1765 aaPredicted RBP9.46□□□□□ -0.9
HPS4-208ENST00000464362 RPA3P35244 121 aaPredicted RBP9.46□□□□□ -0.9
HPS4-208ENST00000464362 USP10Q14694 798 aaKnown RBP9.46□□□□□ -0.9
HPS4-208ENST00000464362 ZNF662Q6ZS27 426 aa9.46□□□□□ -0.9
HPS4-208ENST00000464362 METTL23Q86XA0 190 aa9.46□□□□□ -0.9
HPS4-208ENST00000464362 RNF148Q8N7C7 305 aa9.46□□□□□ -0.9
HPS4-208ENST00000464362 SPON2Q9BUD6 331 aa9.46□□□□□ -0.9
HPS4-208ENST00000464362 UPF3AQ9H1J1 476 aaKnown RBP9.46□□□□□ -0.9
HPS4-208ENST00000464362 MYLK2Q9H1R3 596 aa9.46□□□□□ -0.9
HPS4-208ENST00000464362 RXFP1Q9HBX9 757 aa9.46□□□□□ -0.9
HPS4-208ENST00000464362 CPSF3Q9UKF6 684 aaKnown RBP9.46□□□□□ -0.9
HPS4-208ENST00000464362 AURKCQ9UQB9 309 aa9.46□□□□□ -0.9
HPS4-208ENST00000464362 R3HDM2Q9Y2K5 976 aaKnown RBP9.46□□□□□ -0.9
HPS4-208ENST00000464362 NFAT5O94916 1531 aa9.46□□□□□ -0.9
HPS4-208ENST00000464362 UBA6A0AVT1 1052 aaPredicted RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 PIK3CDO00329 1044 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 RPS6KA5O75582 802 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 TPI1P60174 286 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 ESRRGP62508 458 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 SLC20A2Q08357 652 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 UGCGQ16739 394 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 CCDC60Q8IWA6 550 aaPredicted RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 MREGQ8N565 214 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 TMC2Q8TDI7 906 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 NAF1Q96HR8 494 aaKnown RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 TMEM120AQ9BXJ8 343 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 IL1RL2Q9HB29 575 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 IPO11Q9UI26 975 aaKnown RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 USP18Q9UMW8 372 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 ANGPTL3Q9Y5C1 460 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 KBTBD13C9JR72 458 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 TULP2O00295 520 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 UPP2O95045 317 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 GARTP22102 1010 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 AP3M2P53677 418 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 VCPP55072 806 aaKnown RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 MED21Q13503 144 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 CNGA3Q16281 694 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 KIZQ2M2Z5 673 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 ANKRD20A4Q4UJ75 823 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 PAN2Q504Q3 1202 aaKnown RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 ZCWPW2Q504Y3 356 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 LRRC23Q53EV4 343 aaPredicted RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 ANKRD20A2Q5SQ80 823 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 TMTC4Q5T4D3 741 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 ANKRD20A1Q5TYW2 823 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 NAIF1Q69YI7 327 aaPredicted RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 RAB44Q7Z6P3 723 aaPredicted RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 DEFB132Q7Z7B7 95 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 FBXO16Q8IX29 292 aaPredicted RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 FAM172AQ8WUF8 416 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 PACSIN3Q9UKS6 424 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 CNTRLQ7Z7A1 2325 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 ASAP2O43150 1006 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 SUPT20HL2P0C7V6 817 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 ATXN8OSP0DMR3 200 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 FDX1P10109 184 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 TM4SF1P30408 202 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 TAS2R40P59535 323 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 LY6KQ17RY6 165 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 ABI1Q8IZP0 508 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 CCDC138Q96M89 665 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 KREMEN1Q96MU8 473 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 FOXP3Q9BZS1 431 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 MTO1Q9Y2Z2 717 aaKnown RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 KAT6AQ92794 2004 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 TOPAZ1Q8N9V7 1692 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 DNALI1O14645 258 aaPredicted RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 ENTPD5O75356 428 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 RASA2Q15283 850 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 NFIL3Q16649 462 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 KLC3Q6P597 504 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 SLC30A9Q6PML9 568 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 ANO5Q75V66 913 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 RIBC1Q8N443 379 aaPredicted RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 OR5B17Q8NGF7 314 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 SLC7A14Q8TBB6 771 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 GPRASP2Q96D09 838 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 ZCWPW1Q9H0M4 648 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 C20orf96Q9NUD7 363 aaPredicted RBP9.45□□□□□ -0.9
HPS4-208ENST00000464362 MID2Q9UJV3 735 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 V9GYQ6 96 aa9.45□□□□□ -0.9
HPS4-208ENST00000464362 A8MUI8 341 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 MEI4A8MW99 385 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 E9PBE3 544 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 DNM1LO00429 736 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 WNT10BO00744 389 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 KLHL41O60662 606 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 USP12O75317 370 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 APOEP02649 317 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 AVPR1AP37288 418 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 FAAP100Q0VG06 881 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 LRRC8EQ6NSJ5 796 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 CD302Q8IX05 232 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 C3orf20Q8ND61 904 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 IPMKQ8NFU5 416 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms