RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 MSH4O15457 936 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 TYROBPO43914 113 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 GAS7O60861 476 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 GH1P01241 217 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 MT-ND3P03897 115 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 CCDC166P0CW27 439 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 T-ENOLP0DO92 83 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 IMPDH2P12268 514 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 CPA3P15088 417 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 GSTT1P30711 240 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 CHKAP35790 457 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 ECE1P42892 770 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 KCNJ1P48048 391 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 RHBDL3P58872 404 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 CTBSQ01459 385 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 PPARDQ03181 441 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 SNX1Q13596 522 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 MPP2Q14168 576 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 DDB1Q16531 1140 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 P3H1Q32P28 736 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 TMCO4Q5TGY1 634 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 SYDE2Q5VT97 1194 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 SLFN13Q68D06 897 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 KYAT3Q6YP21 454 aaKnown RBP7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 C1orf229Q6ZS94 237 aaPredicted RBP7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 ACAD11Q709F0 780 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 OTOAQ7RTW8 1153 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 MTDHQ86UE4 582 aaKnown RBP7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 PASD1Q8IV76 773 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 TPH2Q8IWU9 490 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 RBM12BQ8IXT5 1001 aaKnown RBP7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 PPM1KQ8N3J5 372 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 GMCL1P1Q8NEA9 526 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 LMO3Q8TAP4 145 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 SLC20A1Q8WUM9 679 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 SLC5A5Q92911 643 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 PTCD3Q96EY7 689 aaKnown RBP7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 CYTH2Q99418 400 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 RIT2Q99578 217 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 TEKT3Q9BXF9 490 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 CADM1Q9BY67 442 aaKnown RBP7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 PCDH9Q9HC56 1237 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 LRRC4CQ9HCJ2 640 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 TMEM8AQ9HCN3 771 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 CD209Q9NNX6 404 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 MLXIPLQ9NP71 852 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 C1orf112Q9NSG2 853 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 ZDHHC7Q9NXF8 308 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 SLAIN2Q9P270 581 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 TCEAL9Q9UHQ7 104 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 GGA1Q9UJY5 639 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 COQ4Q9Y3A0 265 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 PCDHB2Q9Y5E7 798 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 ATRNL1Q5VV63 1379 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 CFAP69A5D8W1 941 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 TTC36A6NLP5 189 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 ANKRD63C9JTQ0 380 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 F5H6K3 240 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 POC1B-GALNT4F8VUJ3 575 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 ATP9BO43861 1147 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 TOM1O60784 492 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 DKC1O60832 514 aaKnown RBP eCLIP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 PPP1R11O60927 126 aaPredicted RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 ENTPD5O75356 428 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 FAM155BO75949 473 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 TMCC1O94876 653 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 KLHL2O95198 593 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 ITGAVP06756 1048 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 LYNP07948 512 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 PABPC4LP0CB38 370 aaKnown RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 TRIM49P0CI25 452 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 TRIM49CP0CI26 452 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 AKR1B1P15121 316 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 DESP17661 470 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 FGFR3P22607 806 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 KLRC2P26717 231 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 CRABP2P29373 138 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 NMT1P30419 496 aaKnown RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 STAT3P40763 770 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 HSPA13P48723 471 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 MARCKSL1P49006 195 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 PSMC6P62333 389 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 FMO1Q01740 532 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 SF3A3Q12874 501 aaKnown RBP eCLIP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 KLF1Q13351 362 aaPredicted RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 MED21Q13503 144 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 HNRNPDQ14103 355 aaKnown RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 HIF1AQ16665 826 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 SLC4A8Q2Y0W8 1093 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 KHDC1Q4VXA5 237 aaKnown RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 LIN52Q52LA3 116 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 CIAPIN1Q6FI81 312 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 CYP4F22Q6NT55 531 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 KLC3Q6P597 504 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 MARK2Q7KZI7 788 aaKnown RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 NLRP8Q86W28 1048 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 PPIL6Q8IXY8 311 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 PDIK1LQ8N165 341 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 KLHL23Q8NBE8 558 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms