RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ZSCAN31Q96LW9 406 aaPredicted RBP15.55■□□□□ 0.08
SMC1A-204ENST00000463684 POLMQ9NP87 494 aaPredicted RBP15.55■□□□□ 0.08
SMC1A-204ENST00000463684 DDX43Q9NXZ2 648 aaKnown RBP15.55■□□□□ 0.08
SMC1A-204ENST00000463684 BCCIPQ9P287 314 aaKnown RBP eCLIP15.55■□□□□ 0.08
SMC1A-204ENST00000463684 KLK13Q9UKR3 277 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 C2orf78A6NCI8 922 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 H0Y626 953 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
SMC1A-204ENST00000463684 IL18RAPO95256 599 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 TRIM16O95361 564 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 TCF3P15923 654 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 OPRD1P41143 372 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 P2RY2P41231 377 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 ZNF131P52739 623 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 GTF2BQ00403 316 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 RILPL1Q5EBL4 403 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 INTS6LQ5JSJ4 861 aaKnown RBP15.54■□□□□ 0.08
SMC1A-204ENST00000463684 SPDYCQ5MJ68 293 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 ARMCX6Q7L4S7 300 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 SCN4BQ8IWT1 228 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 TMEM86AQ8N2M4 240 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 PDCL2Q8N4E4 241 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 HDDC3Q8N4P3 179 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 WHAMMQ8TF30 809 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 LRRC15Q8TF66 581 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 RLN3Q8WXF3 142 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 CALML4Q96GE6 196 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 GCNT4Q9P109 453 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 GTF3C4Q9UKN8 822 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 ARHGAP26Q9UNA1 814 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 ATG2BQ96BY7 2078 aa15.54■□□□□ 0.08
SMC1A-204ENST00000463684 SPAARA0A1B0GVQ0 90 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 UPK3BL1B0FP48 263 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 UPK3BL2E5RIL1 263 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 SLC26A4O43511 780 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 TBCAO75347 108 aaKnown RBP15.53■□□□□ 0.08
SMC1A-204ENST00000463684 ACAT1P24752 427 aaKnown RBP15.53■□□□□ 0.08
SMC1A-204ENST00000463684 HSF5Q4G112 596 aaPredicted RBP15.53■□□□□ 0.08
SMC1A-204ENST00000463684 ZC2HC1CQ53FD0 456 aaPredicted RBP15.53■□□□□ 0.08
SMC1A-204ENST00000463684 LYSMD4Q5XG99 296 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 MCTP1Q6DN14 999 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 SLC23A3Q6PIS1 610 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 TMEM92Q6UXU6 159 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 PGBD3Q8N328 593 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 CACTINQ8WUQ7 758 aaKnown RBP15.53■□□□□ 0.08
SMC1A-204ENST00000463684 POMGNT1Q8WZA1 660 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 FNBP1Q96RU3 617 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 TMEM74BQ9NUR3 256 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 L1RE1Q9UN81 338 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 AGAP1Q9UPQ3 857 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 STYXL1Q9Y6J8 313 aa15.53■□□□□ 0.08
SMC1A-204ENST00000463684 TISP43B9A030 160 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 KLF8O95600 359 aaPredicted RBP15.52■□□□□ 0.08
SMC1A-204ENST00000463684 CFIP05156 583 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 POLR2BP30876 1174 aaKnown RBP15.52■□□□□ 0.08
SMC1A-204ENST00000463684 TIE1P35590 1138 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 UBA7P41226 1012 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 PTGER3P43115 390 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 LHX1P48742 406 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 TFAMQ00059 246 aaKnown RBP15.52■□□□□ 0.08
SMC1A-204ENST00000463684 GFPT1Q06210 699 aaPredicted RBP15.52■□□□□ 0.08
SMC1A-204ENST00000463684 SEMA3BQ13214 749 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 POSTNQ15063 836 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 CFAP221Q4G0U5 840 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 EOGTQ5NDL2 527 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 ARL6IP4Q66PJ3 421 aaKnown RBP15.52■□□□□ 0.08
SMC1A-204ENST00000463684 PIP4P1Q86T03 277 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 ADGRG2Q8IZP9 1017 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 ALLCQ8N6M5 410 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 TXNDC5Q8NBS9 432 aaKnown RBP15.52■□□□□ 0.08
SMC1A-204ENST00000463684 CEP76Q8TAP6 659 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 SPATA18Q8TC71 538 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 FUBP3Q96I24 572 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMC1A-204ENST00000463684 AK8Q96MA6 479 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 PNKPQ96T60 521 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 GTPBP2Q9BX10 602 aaKnown RBP15.52■□□□□ 0.08
SMC1A-204ENST00000463684 SLC6A14Q9UN76 642 aa15.52■□□□□ 0.08
SMC1A-204ENST00000463684 TSC2P49815 1807 aa15.52■□□□□ 0.07
SMC1A-204ENST00000463684 WDFY3Q8IZQ1 3526 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 ANTXRLA6NF34 631 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 LEFTY2O00292 366 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 SLC9A3R1O14745 358 aaPredicted RBP15.51■□□□□ 0.07
SMC1A-204ENST00000463684 APODP05090 189 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 ITGB3P05106 788 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 PFKLP17858 780 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 PCSK1P29120 753 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 HOXD12P35452 270 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 DUOXA1Q1HG43 343 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 CRELD2Q6UXH1 353 aaPredicted RBP15.51■□□□□ 0.07
SMC1A-204ENST00000463684 C4orf50Q6ZRC1 276 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 CSGALNACT2Q8N6G5 542 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 IL17RCQ8NAC3 791 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 RASSF8Q8NHQ8 419 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 HMGB4Q8WW32 186 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 TRPM5Q9NZQ8 1165 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 MBD1Q9UIS9 605 aaPredicted RBP15.51■□□□□ 0.07
SMC1A-204ENST00000463684 PILRBQ9UKJ0 227 aa15.51■□□□□ 0.07
SMC1A-204ENST00000463684 SGK1O00141 431 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 TAF4O00268 1085 aa15.5■□□□□ 0.07
SMC1A-204ENST00000463684 AP5Z1O43299 807 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms