RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 PSMD2Q13200 908 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 L1TD1Q5T7N2 865 aaKnown RBP22.25■■□□□ 1.15
CPSF7-209ENST00000463244 PSAPL1Q6NUJ1 521 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 USP49Q70CQ1 688 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 BRAPQ7Z569 592 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 SPATA2LQ8IUW3 424 aaPredicted RBP22.25■■□□□ 1.15
CPSF7-209ENST00000463244 CSGALNACT2Q8N6G5 542 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 TOP6BLQ8N6T0 577 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 ARL14EPQ8N8R7 260 aaPredicted RBP22.25■■□□□ 1.15
CPSF7-209ENST00000463244 FSIP1Q8NA03 581 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 FAM84AQ96KN4 292 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 ACCSQ96QU6 501 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 RBAKQ9NYW8 714 aaPredicted RBP22.25■■□□□ 1.15
CPSF7-209ENST00000463244 SNX9Q9Y5X1 595 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 ZFYVE26Q68DK2 2539 aa22.25■■□□□ 1.15
CPSF7-209ENST00000463244 AKAP13Q12802 2813 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 PTPRDP23468 1912 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 C2orf78A6NCI8 922 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 GABRDO14764 452 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 HCRTO43612 131 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 LDHAP00338 332 aaKnown RBP22.24■■□□□ 1.15
CPSF7-209ENST00000463244 PCSK1P29120 753 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 NR1H3Q13133 447 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 LARP1BQ659C4 914 aaKnown RBP22.24■■□□□ 1.15
CPSF7-209ENST00000463244 ADGRF2Q8IZF7 708 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 CCDC26Q8TAB7 109 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 SH3RF2Q8TEC5 729 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 TBC1D7Q9P0N9 293 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 STK17AQ9UEE5 414 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 SIX4Q9UIU6 781 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 SMC3Q9UQE7 1217 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 GON4LQ3T8J9 2241 aa22.24■■□□□ 1.15
CPSF7-209ENST00000463244 C4orf47A7E2U8 309 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 TULP1O00294 542 aaPredicted RBP22.23■■□□□ 1.15
CPSF7-209ENST00000463244 GAP43P17677 238 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 GARTP22102 1010 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 MAGEA11P43364 429 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 DGKEP52429 567 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 KCNB1Q14721 858 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 PMS2CLQ68D20 193 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 FAM171BQ6P995 826 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 SCN4BQ8IWT1 228 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 TSTD1Q8NFU3 115 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 DNAJC19Q96DA6 116 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 LINC00597Q9H2U6 94 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 ARHGAP26Q9UNA1 814 aa22.23■■□□□ 1.15
CPSF7-209ENST00000463244 ASCC3Q8N3C0 2202 aaKnown RBP22.22■■□□□ 1.15
CPSF7-209ENST00000463244 LNP1A1A4G5 178 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 MYMKA6NI61 221 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 GCNT3O95395 438 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 KRT19P08727 400 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 HDCP19113 662 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 GBP1P32455 592 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 RBP5P82980 135 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 SOWAHAQ2M3V2 549 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 USP39Q53GS9 565 aaKnown RBP22.22■■□□□ 1.15
CPSF7-209ENST00000463244 C11orf74Q86VG3 221 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 USP33Q8TEY7 942 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 MTMR12Q9C0I1 747 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 OLFML3Q9NRN5 406 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 CCDC39Q9UFE4 941 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 PCDHB13Q9Y5F0 798 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 ATRXP46100 2492 aa22.22■■□□□ 1.15
CPSF7-209ENST00000463244 K7EQS6 105 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 NFATC1O95644 943 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 OPRD1P41143 372 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 PDE6CP51160 858 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 NOVA1P51513 510 aaKnown RBP22.21■■□□□ 1.15
CPSF7-209ENST00000463244 CASP5P51878 434 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 ZXDBP98169 803 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 C4orf50Q6ZRC1 276 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 LIMS2Q7Z4I7 341 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 RASSF3Q86WH2 238 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 CBWD1Q9BRT8 395 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 PDE11AQ9HCR9 933 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 INVSQ9Y283 1065 aa22.21■■□□□ 1.15
CPSF7-209ENST00000463244 GOLGA8IPA6NC78 632 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 GOLGA8JA6NMD2 632 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 GIPC1O14908 333 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 PROS1P07225 676 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 PI4KAP42356 2102 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 DAB2IPQ5VWQ8 1189 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 VSTM1Q6UX27 236 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 SV2BQ7L1I2 683 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 DPH6Q7L8W6 267 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 SPATA17Q96L03 361 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 CNOT6LQ96LI5 555 aaKnown RBP22.2■■□□□ 1.14
CPSF7-209ENST00000463244 TPSD1Q9BZJ3 242 aa22.2■■□□□ 1.14
CPSF7-209ENST00000463244 MYOFQ9NZM1 2061 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 DMXL2Q8TDJ6 3036 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 FRMD3A2A2Y4 597 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 ATP2C2O75185 946 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 TMEM191BP0C7N4 346 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 PFKLP17858 780 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 SEC13P55735 322 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 ALCAMQ13740 583 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 GAB4Q2WGN9 574 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 C2orf27AQ580R0 203 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 RRAGBQ5VZM2 374 aa22.19■■□□□ 1.14
CPSF7-209ENST00000463244 ANO7Q6IWH7 933 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms