RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ZBED4O75132 1171 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 VIPP01282 170 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 CYP1A1P04798 512 aaPredicted RBP6.53□□□□□ -1.36
COPS3-205ENST00000463097 RPS6KB1P23443 525 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 KLRK1P26718 216 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 ATP1A4Q13733 1029 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 NFYCQ13952 458 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 BOP1Q14137 746 aaKnown RBP6.53□□□□□ -1.36
COPS3-205ENST00000463097 MGAT5BQ3V5L5 792 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 ATXN7L2Q5T6C5 722 aaPredicted RBP6.53□□□□□ -1.36
COPS3-205ENST00000463097 MANEALQ5VSG8 457 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 CACHD1Q5VU97 1274 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 RINT1Q6NUQ1 792 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 NFRKBQ6P4R8 1299 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 MPZL3Q6UWV2 235 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 XYLT1Q86Y38 959 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 GOLGA1Q92805 767 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 ZUFSPQ96AP4 578 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 C3orf49Q96BT1 292 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 GRAMD1AQ96CP6 724 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 RSRC1Q96IZ7 334 aaKnown RBP6.53□□□□□ -1.36
COPS3-205ENST00000463097 MED15Q96RN5 788 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 SGPP1Q9BX95 441 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 SLC46A2Q9BY10 475 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 TTYH3Q9C0H2 523 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 SLC25A32Q9H2D1 315 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 NELFAQ9H3P2 528 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 ELAC1Q9H777 363 aaKnown RBP6.53□□□□□ -1.36
COPS3-205ENST00000463097 NOD2Q9HC29 1040 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 PI4KBQ9UBF8 816 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 SHOC2Q9UQ13 582 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 LMTK3Q96Q04 1460 aa6.53□□□□□ -1.36
COPS3-205ENST00000463097 FSD2A1L4K1 749 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.52□□□□□ -1.37
COPS3-205ENST00000463097 E7EVH7 732 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 DCLK1O15075 740 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 USO1O60763 962 aaKnown RBP6.52□□□□□ -1.37
COPS3-205ENST00000463097 TMCC2O75069 709 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 KRT38O76015 456 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 RASAL1O95294 804 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 ARP10275 920 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 SLC6A2P23975 617 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 SATB1Q01826 763 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 KRT17Q04695 432 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 LRP8Q14114 963 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 KRT32Q14532 448 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 CCDC96Q2M329 555 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 BTBD16Q32M84 506 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 FAM214AQ32MH5 1076 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 TRIM60Q495X7 471 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 SLC9C2Q5TAH2 1124 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 ICE2Q659A1 982 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 ACAD10Q6JQN1 1059 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 PDXDC1Q6P996 788 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 ZNF280BQ86YH2 543 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 KLHL36Q8N4N3 616 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 ANKRD52Q8NB46 1076 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 ZFP28Q8NHY6 868 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 BORCS6Q96GS4 357 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 PWWP2AQ96N64 755 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 BRD8Q9H0E9 1235 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 VPS16Q9H269 839 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 CHODLQ9H9P2 273 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 G6PC2Q9NQR9 355 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 SMYD2Q9NRG4 433 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 ORC3Q9UBD5 711 aaPredicted RBP6.52□□□□□ -1.37
COPS3-205ENST00000463097 C19orf53Q9UNZ5 99 aaPredicted RBP6.52□□□□□ -1.37
COPS3-205ENST00000463097 ZDHHC9Q9Y397 364 aa6.52□□□□□ -1.37
COPS3-205ENST00000463097 PGPEP1LA6NFU8 196 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 J3KTA2 159 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 ORC4O43929 436 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 STC2O76061 302 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 RTN3O95197 1032 aaPredicted RBP6.51□□□□□ -1.37
COPS3-205ENST00000463097 CNPP09543 421 aaKnown RBP6.51□□□□□ -1.37
COPS3-205ENST00000463097 HNRNPA1P09651 372 aaKnown RBP eCLIP6.51□□□□□ -1.37
COPS3-205ENST00000463097 AKT1P31749 480 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 RAD52P43351 418 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 MAN2A2P49641 1150 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 TOB1P50616 345 aaPredicted RBP6.51□□□□□ -1.37
COPS3-205ENST00000463097 ATXN1P54253 815 aaKnown RBP6.51□□□□□ -1.37
COPS3-205ENST00000463097 GPS1Q13098 491 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 GRM4Q14833 912 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 RPS6KA2Q15349 733 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 ZIK1Q3SY52 487 aaPredicted RBP6.51□□□□□ -1.37
COPS3-205ENST00000463097 TTC22Q5TAA0 569 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 HAUS3Q68CZ6 603 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 SP8Q8IXZ3 490 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 TDRD7Q8NHU6 1098 aaKnown RBP6.51□□□□□ -1.37
COPS3-205ENST00000463097 BPIFB1Q8TDL5 484 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 WDR60Q8WVS4 1066 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 TFAP2CQ92754 450 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 DIRC2Q96SL1 478 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 TCF25Q9BQ70 676 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 NUDT16L1Q9BRJ7 211 aaKnown RBP6.51□□□□□ -1.37
COPS3-205ENST00000463097 REEP2Q9BRK0 252 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 CENPOQ9BU64 300 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 LSM14BQ9BX40 385 aaKnown RBP6.51□□□□□ -1.37
COPS3-205ENST00000463097 EPB41L4BQ9H329 900 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 RNPEPQ9H4A4 650 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 ETAA1Q9NY74 926 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms