RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 C2orf71A6NGG8 1288 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 EPOPA6NHQ4 379 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 HHLA1C9JL84 531 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 M0QYV0 167 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 TULP2O00295 520 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 TEX28O15482 410 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 FTLP02792 175 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-202ENST00000463060 CNPP09543 421 aaKnown RBP15.18■□□□□ 0.02
COL6A1-202ENST00000463060 SETSIPP0DME0 302 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 MMP8P22894 467 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 BDNFP23560 247 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 ADORA2BP29275 332 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 MAGEA11P43364 429 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 BCAT1P54687 386 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 CREMQ03060 361 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 BST2Q10589 180 aaKnown RBP15.18■□□□□ 0.02
COL6A1-202ENST00000463060 NAA35Q5VZE5 725 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 PPP2R2DQ66LE6 453 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 TPGS2Q68CL5 300 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 PDE12Q6L8Q7 609 aaKnown RBP15.18■□□□□ 0.02
COL6A1-202ENST00000463060 PMF1Q6P1K2 205 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 LILRA6Q6PI73 481 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 C4orf50Q6ZRC1 276 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 CLEC20AQ6ZU45 233 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 TMC7Q7Z402 723 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 TMEM110Q86TL2 294 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 DNAAF5Q86Y56 855 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 ACRBPQ8NEB7 543 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 ZNF461Q8TAF7 563 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 C2orf15Q8WU43 125 aaKnown RBP15.18■□□□□ 0.02
COL6A1-202ENST00000463060 CPA5Q8WXQ8 436 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 SECISBP2LQ93073 1101 aaKnown RBP15.18■□□□□ 0.02
COL6A1-202ENST00000463060 TIFAQ96CG3 184 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 KLHL5Q96PQ7 755 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 TCF25Q9BQ70 676 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 DESI2Q9BSY9 194 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 SLC4A5Q9BY07 1137 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 RHOBTB2Q9BYZ6 727 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 CRISPLD1Q9H336 500 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 NGRNQ9NPE2 291 aaKnown RBP15.18■□□□□ 0.02
COL6A1-202ENST00000463060 TLR9Q9NR96 1032 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 KCND1Q9NSA2 647 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 HESX1Q9UBX0 185 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 COLQQ9Y215 455 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-202ENST00000463060 PCDHB5Q9Y5E4 795 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 PCDHA13Q9Y5I0 950 aa15.18■□□□□ 0.02
COL6A1-202ENST00000463060 ATP8B3O60423 1300 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 RCCD1A6NED2 376 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 XPO1O14980 1071 aaKnown RBP15.17■□□□□ 0.02
COL6A1-202ENST00000463060 PJA2O43164 708 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 C1RP00736 705 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 ATF2P15336 505 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 NPR3P17342 541 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 CYP2F1P24903 491 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 IRS1P35568 1242 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 MAGEA1P43355 309 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 PLA2G4AP47712 749 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 GABRB2P47870 512 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 CDR1P51861 262 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 KRT83P78385 493 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 PTPN20Q4JDL3 420 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 VSTM1Q6UX27 236 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 ZNF662Q6ZS27 426 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 MON1BQ7L1V2 547 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 SPATA2LQ8IUW3 424 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-202ENST00000463060 MCOLN2Q8IZK6 566 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 ATAD1Q8NBU5 361 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 C1orf131Q8NDD1 294 aaKnown RBP15.17■□□□□ 0.02
COL6A1-202ENST00000463060 KIAA1524Q8TCG1 905 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 SPPL2BQ8TCT7 592 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 SMARCD1Q96GM5 515 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 VCPIP1Q96JH7 1222 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 MED10Q9BTT4 135 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 PDCL3Q9H2J4 239 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 CYLDQ9NQC7 956 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 SEPT11Q9NVA2 429 aaKnown RBP15.17■□□□□ 0.02
COL6A1-202ENST00000463060 HSFX1Q9UBD0 423 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 AFF4Q9UHB7 1163 aaKnown RBP15.17■□□□□ 0.02
COL6A1-202ENST00000463060 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 MAFFQ9ULX9 164 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 PCDHGC5Q9Y5F6 944 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 TRANK1O15050 2925 aa15.17■□□□□ 0.02
COL6A1-202ENST00000463060 HIDE1A8MVS5 230 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 TNFRSF10BO14763 440 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 LPXNO60711 386 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 AP1G2O75843 785 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 SEC24AO95486 1093 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 FAM200BP0CF97 657 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 HAPLN1P10915 354 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-202ENST00000463060 CPB1P15086 417 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 NDUFV1P49821 464 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 GALCP54803 685 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 ARPP19P56211 112 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
COL6A1-202ENST00000463060 PDCLQ13371 301 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 SMC1AQ14683 1233 aaKnown RBP15.16■□□□□ 0.02
COL6A1-202ENST00000463060 SPA17Q15506 151 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 RAB41Q5JT25 222 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 PPP1R2P3Q6NXS1 205 aa15.16■□□□□ 0.02
COL6A1-202ENST00000463060 REXO1L1PQ8IX06 675 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms