RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 HIP1RO75146 1068 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 ZIC2O95409 532 aaPredicted RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 HAPLN1P10915 354 aaPredicted RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 CD59P13987 128 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 HOXD12P35452 270 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 AVPR1AP37288 418 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 TNFSF9P41273 254 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 DHPSP49366 369 aaPredicted RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 TUFMP49411 452 aaKnown RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 GUCY2FP51841 1108 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 SPAG1Q07617 926 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 DMP1Q13316 513 aaPredicted RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 MTF1Q14872 753 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 CRY1Q16526 586 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 ZNF423Q2M1K9 1284 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 MAP7D1Q3KQU3 841 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 SLC39A12Q504Y0 691 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 TXNDC8Q6A555 127 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 ANO7Q6IWH7 933 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 USP37Q86T82 979 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 LRRTM3Q86VH5 581 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 MON1AQ86VX9 555 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 DIS3L2Q8IYB7 885 aaKnown RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 CPA6Q8N4T0 437 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 FRMD1Q8N878 549 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 TMEM161BQ8NDZ6 487 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 PRR7Q8TB68 274 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 C2orf15Q8WU43 125 aaKnown RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 ADAMTS14Q8WXS8 1223 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 TSC1Q92574 1164 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 PIGKQ92643 395 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 SENP8Q96LD8 212 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 GCNAQ96QF7 691 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 SLC22A12Q96S37 553 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 SEPT5Q99719 369 aaPredicted RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 ORC3Q9UBD5 711 aaPredicted RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 UBQLN1Q9UMX0 589 aaKnown RBP8.35□□□□□ -1.07
SMC3-202ENST00000462899 CABIN1Q9Y6J0 2220 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 MYH10P35580 1976 aa8.35□□□□□ -1.07
SMC3-202ENST00000462899 ATXN2Q99700 1313 aaKnown RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 KNL1Q8NG31 2342 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 ANO9A1A5B4 782 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 CCDC169A6NNP5 214 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 CFAP99D6REC4 459 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 PIRO00625 290 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 MAPTP10636 758 aaKnown RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 ODC1P11926 461 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 HARSP12081 509 aaKnown RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 MAPK8P45983 427 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 ZXDBP98169 803 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 FAM160A1Q05DH4 1040 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 MESP2Q0VG99 397 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 BFSP1Q12934 665 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 ORC2Q13416 577 aaPredicted RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 VEPH1Q14D04 833 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 ENOX2Q16206 610 aaKnown RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 MGAT5BQ3V5L5 792 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 SPATA1Q5VX52 437 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 HAUS3Q68CZ6 603 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 ZPBP2Q6X784 338 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 CCNI2Q6ZMN8 369 aaPredicted RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 C1orf186Q6ZWK4 172 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 SFTPA1Q8IWL2 248 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 C4orf32Q8N8J7 132 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 STKLD1Q8NE28 680 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 ERMNQ8TAM6 284 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 SPPL2BQ8TCT7 592 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 GIPC2Q8TF65 315 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 ATP2A3Q93084 1043 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 TRMT2BQ96GJ1 504 aaKnown RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 MYRFLQ96LU7 910 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 RUSC1Q9BVN2 902 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 NUSAP1Q9BXS6 441 aaKnown RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 CCSER1Q9C0I3 900 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 C17orf75Q9HAS0 396 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 KMT5AQ9NQR1 393 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 FSCN3Q9NQT6 498 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 GCNT4Q9P109 453 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 ANKFY1Q9P2R3 1169 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 DKK4Q9UBT3 224 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 RBM19Q9Y4C8 960 aaKnown RBP8.34□□□□□ -1.07
SMC3-202ENST00000462899 WNT6Q9Y6F9 365 aa8.34□□□□□ -1.07
SMC3-202ENST00000462899 HECTD1Q9ULT8 2610 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 LACTBL1A8MY62 500 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 SLC16A4O15374 487 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 C1QL1O75973 258 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 NOL4O94818 638 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 DKK1O94907 266 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 CLTAP09496 248 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 OR52Z1P0C646 297 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 ITPKAP23677 461 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 PAX3P23760 479 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 CDC25AP30304 524 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 MCM7P33993 719 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 DPP6P42658 865 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 GPR15P49685 360 aa8.33□□□□□ -1.08
SMC3-202ENST00000462899 SMARCB1Q12824 385 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms