RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 PPP2CAP67775 309 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 SPP2Q13103 211 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 UBE3CQ15386 1083 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 PUM3Q15397 648 aaKnown RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 RRP12Q5JTH9 1297 aaKnown RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 METTL24Q5JXM2 366 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 AKNAD1Q5T1N1 836 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 SLC39A5Q6ZMH5 540 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 ARHGEF18Q6ZSZ5 1173 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 GPR155Q7Z3F1 870 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 GPR142Q7Z601 462 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 FRMD5Q7Z6J6 570 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 PIK3C3Q8NEB9 887 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 TRPV1Q8NER1 839 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 RIN2Q8WYP3 895 aaPredicted RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 BADQ92934 168 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 TRIM43Q96BQ3 446 aaPredicted RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 CYFIP2Q96F07 1278 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 C8orf48Q96LL4 319 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 KCNC2Q96PR1 638 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 ASB2Q96Q27 587 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 P2RX7Q99572 595 aaKnown RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 BICC1Q9H694 974 aaKnown RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 DDX20Q9UHI6 824 aaKnown RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 LRRFIP2Q9Y608 721 aaKnown RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 ATG2AQ2TAZ0 1938 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 PDS5AQ29RF7 1337 aaKnown RBP5.79□□□□□ -1.48
COPS3-204ENST00000462236 SLC26A4O43511 780 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 TRIM13O60858 407 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 DTNBO60941 627 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 FRAT2O75474 233 aaPredicted RBP5.79□□□□□ -1.48
COPS3-204ENST00000462236 RPLP2P05387 115 aaKnown RBP5.79□□□□□ -1.48
COPS3-204ENST00000462236 IFIT1P09914 478 aaKnown RBP5.79□□□□□ -1.48
COPS3-204ENST00000462236 CYBAP13498 195 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 GYPEP15421 78 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 CRHR1P34998 444 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 BACE1P56817 501 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 RAC3P60763 192 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 PPP3CAQ08209 521 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 MST1LQ2TV78 715 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 ZFYVE27Q5T4F4 411 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 PPP4R3AQ6IN85 833 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 ATG9AQ7Z3C6 839 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 MYO1HQ8N1T3 1032 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 MAGEB6Q8N7X4 407 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 GPRC5AQ8NFJ5 357 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 ZNF480Q8WV37 535 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 LPIN2Q92539 896 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 HDAC10Q969S8 669 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 SLC2A13Q96QE2 648 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 NELFAQ9H3P2 528 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 BCO1Q9HAY6 547 aa5.79□□□□□ -1.48
COPS3-204ENST00000462236 PUF60Q9UHX1 559 aaKnown RBP5.79□□□□□ -1.48
COPS3-204ENST00000462236 RBM8AQ9Y5S9 174 aaKnown RBP5.79□□□□□ -1.48
COPS3-204ENST00000462236 FANCIQ9NVI1 1328 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 BAZ2AQ9UIF9 1905 aaKnown RBP5.78□□□□□ -1.48
COPS3-204ENST00000462236 GPR75-ASB3A0A0A6YYF3 556 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 KIAA0355O15063 1070 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 SGTAO43765 313 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 AKR1B10O60218 316 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 B4GALT4O60513 344 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 PRAMEF4O60810 478 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 TOX4O94842 621 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 CNOT4O95628 575 aaKnown RBP5.78□□□□□ -1.48
COPS3-204ENST00000462236 POU2F2P09086 479 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 GSPT1P15170 499 aaKnown RBP5.78□□□□□ -1.48
COPS3-204ENST00000462236 ECHS1P30084 290 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 BPIFB4P59827 614 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 JAG1P78504 1218 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 MRPS5P82675 430 aaKnown RBP5.78□□□□□ -1.48
COPS3-204ENST00000462236 GRB14Q14449 540 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 HLTFQ14527 1009 aaKnown RBP eCLIP5.78□□□□□ -1.48
COPS3-204ENST00000462236 TBR1Q16650 682 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 RNF151Q2KHN1 245 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 SLFN13Q68D06 897 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 PRR18Q8N4B5 295 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 KLHDC4Q8TBB5 520 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 HOXB13Q92826 284 aaPredicted RBP5.78□□□□□ -1.48
COPS3-204ENST00000462236 NEIL1Q96FI4 390 aaPredicted RBP5.78□□□□□ -1.48
COPS3-204ENST00000462236 CCDC136Q96JN2 1154 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 UHRF1Q96T88 793 aaPredicted RBP5.78□□□□□ -1.48
COPS3-204ENST00000462236 C1QTNF1Q9BXJ1 281 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 DNAJC18Q9H819 358 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 MANSC1Q9H8J5 431 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 C9orf78Q9NZ63 289 aaPredicted RBP5.78□□□□□ -1.48
COPS3-204ENST00000462236 THEGQ9P2T0 379 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 IPPQ9Y573 584 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 CFAP20Q9Y6A4 193 aaKnown RBP5.78□□□□□ -1.48
COPS3-204ENST00000462236 ADAMTS20P59510 1910 aa5.78□□□□□ -1.48
COPS3-204ENST00000462236 MROH7-TTC4A0A0A0MT08 1334 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 GVINP1Q7Z2Y8 2422 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 SIP14410 1827 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 C5orf42Q9H799 3197 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.77□□□□□ -1.49
COPS3-204ENST00000462236 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.77□□□□□ -1.49
COPS3-204ENST00000462236 SLC15A5A6NIM6 579 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 C19orf81C9J6K1 198 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 EYA2O00167 538 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 ERC2O15083 957 aa5.77□□□□□ -1.49
COPS3-204ENST00000462236 HTRA2O43464 458 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms