RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 TBXAS1P24557 533 aaPredicted RBP19.33■□□□□ 0.68
HPS3-204ENST00000462030 CPA2P48052 419 aa19.33■□□□□ 0.68
HPS3-204ENST00000462030 SARNPP82979 210 aaKnown RBP19.33■□□□□ 0.68
HPS3-204ENST00000462030 OCRLQ01968 901 aa19.33■□□□□ 0.68
HPS3-204ENST00000462030 PPP1R15BQ5SWA1 713 aa19.33■□□□□ 0.68
HPS3-204ENST00000462030 FAM182AQ5T1J6 154 aa19.33■□□□□ 0.68
HPS3-204ENST00000462030 ARHGEF16Q5VV41 709 aa19.33■□□□□ 0.68
HPS3-204ENST00000462030 OR52E8Q6IFG1 317 aa19.33■□□□□ 0.68
HPS3-204ENST00000462030 ZC3H18Q86VM9 953 aaKnown RBP19.33■□□□□ 0.68
HPS3-204ENST00000462030 MTO1Q9Y2Z2 717 aaKnown RBP19.33■□□□□ 0.68
HPS3-204ENST00000462030 E5RJQ4 531 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 CST8O60676 142 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 MYL2P10916 166 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 NEK3P51956 506 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 PTK7Q13308 1070 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 MEX3CQ5U5Q3 659 aaKnown RBP19.32■□□□□ 0.68
HPS3-204ENST00000462030 RFX8Q6ZV50 586 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 UNC45BQ8IWX7 931 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 TUBB6Q9BUF5 446 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 ARHGEF4Q9NR80 690 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 XPO7Q9UIA9 1087 aaKnown RBP19.32■□□□□ 0.68
HPS3-204ENST00000462030 WASF2Q9Y6W5 498 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 FCHO1O14526 889 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 PRKCEQ02156 737 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 NCOA4Q13772 614 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 PIGHQ14442 188 aaPredicted RBP19.32■□□□□ 0.68
HPS3-204ENST00000462030 CIAPIN1Q6FI81 312 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 PPP1R2P3Q6NXS1 205 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 ALYREFQ86V81 257 aaKnown RBP19.32■□□□□ 0.68
HPS3-204ENST00000462030 CCDC60Q8IWA6 550 aaPredicted RBP19.32■□□□□ 0.68
HPS3-204ENST00000462030 CGRRF1Q99675 332 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 SYNCQ9H7C4 482 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 SLC38A10Q9HBR0 1119 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 CYP26B1Q9NR63 512 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 PAPOLBQ9NRJ5 636 aaKnown RBP19.32■□□□□ 0.68
HPS3-204ENST00000462030 C2CD2Q9Y426 696 aa19.32■□□□□ 0.68
HPS3-204ENST00000462030 FAM237BA0A1B0GVD1 139 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 IL1R2P27930 398 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 PAPOLAP51003 745 aaKnown RBP19.31■□□□□ 0.68
HPS3-204ENST00000462030 RTP1P59025 263 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 FAAP100Q0VG06 881 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 THOC5Q13769 683 aaKnown RBP19.31■□□□□ 0.68
HPS3-204ENST00000462030 MTERF2Q49AM1 385 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 CCDC62Q6P9F0 684 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 CHSY1Q86X52 802 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 KBTBD2Q8IY47 623 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 UBR7Q8N806 425 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 RSAD2Q8WXG1 361 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 ATP6V0A1Q93050 837 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 OXNAD1Q96HP4 312 aaPredicted RBP19.31■□□□□ 0.68
HPS3-204ENST00000462030 APOPT1Q96IL0 206 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 PHACTR1Q9C0D0 580 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 NMUR2Q9GZQ4 415 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 STYXL1Q9Y6J8 313 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 EDN1P05305 212 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 CD48P09326 243 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 RARBP10826 455 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 PYGBP11216 843 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 SKIP12755 728 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 AMPD1P23109 780 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 BASP1P80723 227 aaKnown RBP19.31■□□□□ 0.68
HPS3-204ENST00000462030 SYCP2LQ5T4T6 812 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 WDTC1Q8N5D0 677 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 PDCD7Q8N8D1 485 aaKnown RBP19.31■□□□□ 0.68
HPS3-204ENST00000462030 RDM1Q8NG50 284 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 CFAP61Q8NHU2 1237 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 STMN2Q93045 179 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 TMEM143Q96AN5 459 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 IFT43Q96FT9 208 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 STX18Q9P2W9 335 aaKnown RBP19.31■□□□□ 0.68
HPS3-204ENST00000462030 KAT6AQ92794 2004 aa19.31■□□□□ 0.68
HPS3-204ENST00000462030 CNTNAP2Q9UHC6 1331 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 TGDSO95455 350 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 ITGBL1O95965 494 aaPredicted RBP19.3■□□□□ 0.68
HPS3-204ENST00000462030 CST3P01034 146 aaPredicted RBP19.3■□□□□ 0.68
HPS3-204ENST00000462030 HARSP12081 509 aaKnown RBP19.3■□□□□ 0.68
HPS3-204ENST00000462030 ELK3P41970 407 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 SLC25A11Q02978 314 aaKnown RBP19.3■□□□□ 0.68
HPS3-204ENST00000462030 KRT72Q14CN4 511 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 KBTBD12Q3ZCT8 623 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 GPAT2Q6NUI2 795 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 SH2D5Q6ZV89 423 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 PDIK1LQ8N165 341 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 ARFGAP1Q8N6T3 406 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.3■□□□□ 0.68
HPS3-204ENST00000462030 FBXO27Q8NI29 283 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 MSTO1Q9BUK6 570 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 TARS2Q9BW92 718 aaKnown RBP19.3■□□□□ 0.68
HPS3-204ENST00000462030 VCXQ9H320 206 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.3■□□□□ 0.68
HPS3-204ENST00000462030 AP1B1Q10567 949 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 DLGAP5Q15398 846 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 FOXB2Q5VYV0 432 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 NIPA2Q8N8Q9 360 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 FAM71DQ8N9W8 422 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 CYTH2Q99418 400 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 KRT82Q9NSB4 513 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 CNTN3Q9P232 1028 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 TJP2Q9UDY2 1190 aa19.3■□□□□ 0.68
HPS3-204ENST00000462030 SCOCQ9UIL1 159 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms