RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ENDOVQ8N8Q3 282 aaKnown RBP6.18□□□□□ -1.42
CLK1-207ENST00000461981 C1orf131Q8NDD1 294 aaKnown RBP6.18□□□□□ -1.42
CLK1-207ENST00000461981 RDM1Q8NG50 284 aa6.18□□□□□ -1.42
CLK1-207ENST00000461981 GIPC3Q8TF64 312 aa6.18□□□□□ -1.42
CLK1-207ENST00000461981 RUBCNQ92622 972 aa6.18□□□□□ -1.42
CLK1-207ENST00000461981 KRT12Q99456 494 aa6.18□□□□□ -1.42
CLK1-207ENST00000461981 C16orf70Q9BSU1 422 aa6.18□□□□□ -1.42
CLK1-207ENST00000461981 DENND2DQ9H6A0 471 aaPredicted RBP6.18□□□□□ -1.42
CLK1-207ENST00000461981 ZNF304Q9HCX3 659 aa6.18□□□□□ -1.42
CLK1-207ENST00000461981 INTS9Q9NV88 658 aaKnown RBP6.18□□□□□ -1.42
CLK1-207ENST00000461981 PCDHA2Q9Y5H9 948 aa6.18□□□□□ -1.42
CLK1-207ENST00000461981 CYP2D7A0A087X1C5 515 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 PNMA6FA0A0J9YX94 578 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 TLDC2A0PJX2 215 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 A6NL46 340 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 CAPN9O14815 690 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 SUN1O94901 812 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 YEATS4O95619 227 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 STAMBPO95630 424 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 LINC00271P0C7V0 271 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 LAG3P18627 525 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 TNFRSF8P28908 595 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 HSPA9P38646 679 aaKnown RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 GRIA2P42262 883 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 MTHFRP42898 656 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 ZNF132P52740 706 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 NHLH1Q02575 133 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 LRRC14Q15048 493 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 KHDC1Q4VXA5 237 aaKnown RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 EPC2Q52LR7 807 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 ARHGEF16Q5VV41 709 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 LLGL2Q6P1M3 1020 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 NSMFQ6X4W1 530 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 DDX42Q86XP3 938 aaKnown RBP eCLIP6.17□□□□□ -1.42
CLK1-207ENST00000461981 GPIHBP1Q8IV16 184 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 GRAMD1CQ8IYS0 662 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 CCDC51Q96ER9 411 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 FAM227BQ96M60 508 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 VPS16Q9H269 839 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 PARVBQ9HBI1 364 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 GDF3Q9NR23 364 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 PTTG2Q9NZH5 202 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 HAO1Q9UJM8 370 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 USTQ9Y2C2 406 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 PCDHGA3Q9Y5H0 932 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 TRPV2Q9Y5S1 764 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 CAPN6Q9Y6Q1 641 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 UMODL1Q5DID0 1318 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 ANO9A1A5B4 782 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 FAM47E-STBD1D6RA91 191 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 GOLGA8TH3BQL2 631 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 KRT36O76013 467 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 UNC5CO95185 931 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 PABPC4LP0CB38 370 aaKnown RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 GOLGA8HP0CJ92 632 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 CMA1P23946 247 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 HOXD13P35453 343 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 CHKAP35790 457 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 CETN2P41208 172 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 MXI1P50539 228 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 CCL23P55773 120 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 POLR2FP61218 127 aaKnown RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 SEPT6Q14141 434 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 CNGA3Q16281 694 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 WDR72Q3MJ13 1102 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 ARL13BQ3SXY8 428 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 ZNF484Q5JVG2 852 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 ANO1Q5XXA6 986 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 RBM44Q6ZP01 1051 aaKnown RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 OTOP2Q7RTS6 562 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 VSIG1Q86XK7 387 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 KLHL7Q8IXQ5 586 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 SPERTQ8NA61 448 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 RIN3Q8TB24 985 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 ZSCAN10Q96SZ4 725 aaPredicted RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 ZNF184Q99676 751 aaPredicted RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 PHF7Q9BWX1 381 aaPredicted RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 SMARCAD1Q9H4L7 1026 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 DCLRE1BQ9H816 532 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 CNOT10Q9H9A5 744 aaKnown RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 NGRNQ9NPE2 291 aaKnown RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 CNGB3Q9NQW8 809 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 PDGFCQ9NRA1 345 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 GJB4Q9NTQ9 266 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 TRMT13Q9NUP7 481 aaKnown RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 TRNAU1APQ9NX07 287 aaKnown RBP6.17□□□□□ -1.42
CLK1-207ENST00000461981 FBXL5Q9UKA1 691 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 MAN1B1Q9UKM7 699 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 NFS1Q9Y697 457 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 TRIOBPQ9H2D6 2365 aa6.17□□□□□ -1.42
CLK1-207ENST00000461981 LOC105371267A0A1B0GV96 52 aa6.16□□□□□ -1.42
CLK1-207ENST00000461981 CFAP69A5D8W1 941 aa6.16□□□□□ -1.42
CLK1-207ENST00000461981 GOLGA8IPA6NC78 632 aa6.16□□□□□ -1.42
CLK1-207ENST00000461981 NFIBO00712 420 aa6.16□□□□□ -1.42
CLK1-207ENST00000461981 ATG7O95352 703 aa6.16□□□□□ -1.42
CLK1-207ENST00000461981 MOCS3O95396 460 aa6.16□□□□□ -1.42
CLK1-207ENST00000461981 ZBTB11O95625 1053 aaPredicted RBP6.16□□□□□ -1.42
CLK1-207ENST00000461981 LMNAP02545 664 aaKnown RBP6.16□□□□□ -1.42
CLK1-207ENST00000461981 ENO2P09104 434 aaPredicted RBP6.16□□□□□ -1.42
CLK1-207ENST00000461981 PRCPP42785 496 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms