RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 DCLRE1AQ6PJP8 1040 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 HOOK3Q86VS8 718 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC13A5Q86YT5 568 aaPredicted RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ZDHHC17Q8IUH5 632 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ANKRD52Q8NB46 1076 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 TTC13Q8NBP0 860 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 RNF139Q8WU17 664 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 RSAD2Q8WXG1 361 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 KRT35Q92764 455 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 APBB2Q92870 758 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 GDAP1L1Q96MZ0 367 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 TWNKQ96RR1 684 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM204AQ9H8W3 233 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM114A2Q9NRY5 505 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 HMGXB4Q9UGU5 601 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CDH9Q9ULB4 789 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 COG5Q9UP83 839 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CNTN6Q9UQ52 1028 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 FAN1Q9Y2M0 1017 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 DOCK5Q9H7D0 1870 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 DOCK3Q8IZD9 2030 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM187AA6NFU0 413 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 SPDYE4A6NLX3 237 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 SIGLEC16A6NMB1 481 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 H7C0C1 242 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PDE2AO00408 941 aaPredicted RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 NDC80O14777 642 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PHF2O75151 1096 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 STK10O94804 968 aaKnown RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 FBXO21O94952 628 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 LRPAP1P30533 357 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 GRIK1P39086 918 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ADCY8P40145 1251 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 BRCC3P46736 316 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ATP5OP48047 213 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 LMAN1P49257 510 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ALDH7A1P49419 539 aaKnown RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CLCNKBP51801 687 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 EPHB4P54760 987 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CDH6P55285 790 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 BCAR1P56945 870 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 VSNL1P62760 191 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CUL1Q13616 776 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 IKBKEQ14164 716 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 SOWAHAQ2M3V2 549 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PPP1R26Q5T8A7 1209 aaPredicted RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF280DQ6N043 979 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 LLGL2Q6P1M3 1020 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CEP128Q6ZU80 1094 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PDZD4Q76G19 769 aaPredicted RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 KRT222Q8N1A0 295 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 RXFP2Q8WXD0 754 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 RUBCNQ92622 972 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 WNT8BQ93098 351 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 HAUS1Q96CS2 278 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 SMARCD1Q96GM5 515 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 HES6Q96HZ4 224 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 HSFY1Q96LI6 401 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 CPXM1Q96SM3 734 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 SYT11Q9BT88 431 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 LRRC1Q9BTT6 524 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 TMEM161AQ9NX61 479 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 GDAP2Q9NXN4 497 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 ABI2Q9NYB9 513 aaPredicted RBP4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 AMACRQ9UHK6 382 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 STXBP5LQ9Y2K9 1186 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PCDHA3Q9Y5H8 950 aa4.33□□□□□ -1.72
ATP13A3-206ENST00000461660 PIRO00625 290 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 LPXNO60711 386 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 RALAP11233 206 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 NPR3P17342 541 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 WARSP23381 471 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ELF1P32519 619 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 CTNNA1P35221 906 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 RFC1P35251 1148 aaPredicted RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SULT1E1P49888 294 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 MAP3K7CLP57077 242 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ADIGQ0VDE8 80 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 DHX34Q14147 1143 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SKIDA1Q1XH10 827 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ARL13BQ3SXY8 428 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 CTXN3Q4LDR2 81 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 FAM171A1Q5VUB5 890 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ARHGAP17Q68EM7 881 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 FBXO46Q6PJ61 603 aaPredicted RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 AGMOQ6ZNB7 445 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 NECAB2Q7Z6G3 386 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 SLFN11Q7Z7L1 901 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 PIGZQ86VD9 579 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 BBOF1Q8ND07 529 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 EXD1Q8NHP7 514 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 C1orf54Q8WWF1 131 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 TMEM169Q96HH4 297 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 TRIM7Q9C029 511 aa4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 MTIF3Q9H2K0 278 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 DHX35Q9H5Z1 703 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 DMAP1Q9NPF5 467 aaPredicted RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNFX1Q9P2E3 1918 aaKnown RBP4.32□□□□□ -1.72
ATP13A3-206ENST00000461660 EVPLQ92817 2033 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms