RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 SETSIPP0DME0 302 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 LCP1P13796 627 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 CCDC130P13994 396 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 GPD1P21695 349 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 CHRNA3P32297 505 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 SOX11P35716 441 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 PEX5P50542 639 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 BCAT1P54687 386 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 PRSS12P56730 875 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 TAS2R40P59535 323 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 SNX1Q13596 522 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 DHX34Q14147 1143 aaKnown RBP7.16□□□□□ -1.26
MSH2-204ENST00000461394 LPIN1Q14693 890 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 CASP8Q14790 479 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 PPP1R7Q15435 360 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 SOWAHAQ2M3V2 549 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 XKR4Q5GH76 650 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 BEND6Q5SZJ8 279 aaPredicted RBP7.16□□□□□ -1.26
MSH2-204ENST00000461394 MAP3K21Q5TCX8 1036 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 CCSAPQ6IQ19 270 aaPredicted RBP7.16□□□□□ -1.26
MSH2-204ENST00000461394 FAM183BPQ6ZVS7 135 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 RPAINQ86UA6 219 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 METTL23Q86XA0 190 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 XYLT1Q86Y38 959 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 CCDC105Q8IYK2 499 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 TOP6BLQ8N6T0 577 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 EMC1Q8N766 993 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 GOLGA6L1Q8N7Z2 621 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 ZNF784Q8NCA9 323 aaPredicted RBP7.16□□□□□ -1.26
MSH2-204ENST00000461394 JOSD2Q8TAC2 188 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 URGCPQ8TCY9 931 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 SH3TC2Q8TF17 1288 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 CASKIN2Q8WXE0 1202 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 CD101Q93033 1021 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 PPP1R10Q96QC0 940 aaKnown RBP7.16□□□□□ -1.26
MSH2-204ENST00000461394 LPIN3Q9BQK8 851 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 TRIM51Q9BSJ1 452 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 HEMGNQ9BXL5 484 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 AGO3Q9H9G7 860 aaKnown RBP7.16□□□□□ -1.26
MSH2-204ENST00000461394 UBN1Q9NPG3 1134 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 FAM114A2Q9NRY5 505 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 ASNSD1Q9NWL6 643 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 GDAP2Q9NXN4 497 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 DDX56Q9NY93 547 aaKnown RBP7.16□□□□□ -1.26
MSH2-204ENST00000461394 TJP2Q9UDY2 1190 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 CYTH4Q9UIA0 394 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 TMEM59LQ9UK28 342 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 NFU1Q9UMS0 254 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 L1RE1Q9UN81 338 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.16□□□□□ -1.26
MSH2-204ENST00000461394 GRIN2DO15399 1336 aa7.16□□□□□ -1.26
MSH2-204ENST00000461394 LRRD1A4D1F6 860 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 FAM187AA6NFU0 413 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 ZSCAN5CA6NGD5 496 aaPredicted RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 MEIS3P2A8K0S8 358 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 F8VP50 259 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 ARVCFO00192 962 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 HCRTO43612 131 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 MGEA5O60502 916 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 HSF2BPO75031 334 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 CAND2O75155 1236 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 GRAP2O75791 330 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 KRT7P08729 469 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 RALAP11233 206 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 FGFR1P11362 822 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 ODC1P11926 461 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 CKBP12277 381 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 WARSP23381 471 aaKnown RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 ACAT1P24752 427 aaKnown RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 TNFRSF8P28908 595 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 LRPAP1P30533 357 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 RFC1P35251 1148 aaPredicted RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 GPD2P43304 727 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 CARSP49589 748 aaKnown RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 CLCNKBP51801 687 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 LILRA4P59901 499 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 BST2Q10589 180 aaKnown RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 GRIK3Q13003 919 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 CUL1Q13616 776 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 CDO1Q16878 200 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 MDH1BQ5I0G3 518 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 FAM26DQ5JW98 314 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 WSCD1Q658N2 575 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 ARHGAP17Q68EM7 881 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 CCDC137Q6PK04 289 aaKnown RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 AGMOQ6ZNB7 445 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 GSTA5Q7RTV2 222 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 OSTM1Q86WC4 334 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 KATNAL2Q8IYT4 538 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 RCOR2Q8IZ40 523 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 EXD1Q8NHP7 514 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 SLC2A14Q8TDB8 520 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 GRK7Q8WTQ7 553 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 C1orf54Q8WWF1 131 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 HSPH1Q92598 858 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 ACSF2Q96CM8 615 aaPredicted RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 SENP8Q96LD8 212 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 FAM193BQ96PV7 902 aaPredicted RBP7.15□□□□□ -1.26
MSH2-204ENST00000461394 FUT8Q9BYC5 575 aa7.15□□□□□ -1.26
MSH2-204ENST00000461394 ALG2Q9H553 416 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms