RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 MFSD6LQ8IWD5 586 aa23.96■■□□□ 1.43
TRAF4-207ENST00000461195 TMEM105Q8N8V8 129 aa23.96■■□□□ 1.43
TRAF4-207ENST00000461195 SHDQ96IW2 340 aa23.96■■□□□ 1.43
TRAF4-207ENST00000461195 ELOVL4Q9GZR5 314 aa23.96■■□□□ 1.43
TRAF4-207ENST00000461195 TBC1D17Q9HA65 648 aa23.96■■□□□ 1.43
TRAF4-207ENST00000461195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.96■■□□□ 1.431e-9■■■■■ 64.8
TRAF4-207ENST00000461195 PPP1R3GB7ZBB8 358 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 AOC1P19801 751 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 DDX6P26196 483 aaKnown RBP eCLIP23.95■■□□□ 1.42
TRAF4-207ENST00000461195 WEE1P30291 646 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 NUBP1P53384 320 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 SLC44A4Q53GD3 710 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 DCAF17Q5H9S7 520 aaPredicted RBP23.95■■□□□ 1.42
TRAF4-207ENST00000461195 TCERG1LQ5VWI1 586 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 PHLDB3Q6NSJ2 640 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 NELFBQ8WX92 580 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 MRPS31Q92665 395 aaKnown RBP23.95■■□□□ 1.42
TRAF4-207ENST00000461195 CEP63Q96MT8 703 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 B3GNT5Q9BYG0 378 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 BCO2Q9BYV7 579 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 BRD9Q9H8M2 597 aa23.95■■□□□ 1.42
TRAF4-207ENST00000461195 APOBEC3GQ9HC16 384 aaKnown RBP23.95■■□□□ 1.42
TRAF4-207ENST00000461195 ARMCX3Q9UH62 379 aaPredicted RBP23.95■■□□□ 1.42
TRAF4-207ENST00000461195 NCANO14594 1321 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 ATP8B3O60423 1300 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 USP34Q70CQ2 3546 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 BICDL2A1A5D9 508 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 DPYSL4O14531 572 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 GDI1P31150 447 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 PRKCQQ04759 706 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 TCF15Q12870 199 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 MLF2Q15773 248 aaPredicted RBP23.94■■□□□ 1.42
TRAF4-207ENST00000461195 CAMK4Q16566 473 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 FOXR2Q6PJQ5 311 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 UNC93AQ86WB7 457 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 TRIML1Q8N9V2 468 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 FBXL13Q8NEE6 735 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 DNASE1L2Q92874 299 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 IRF7Q92985 503 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 C8orf48Q96LL4 319 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 SLC46A2Q9BY10 475 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 ZNF518BQ9C0D4 1074 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 NIF3L1Q9GZT8 377 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 CYP3A43Q9HB55 503 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 KIAA1468Q9P260 1216 aa23.94■■□□□ 1.42
TRAF4-207ENST00000461195 CACNA1HO95180 2353 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 ZNF638Q14966 1978 aaKnown RBP23.93■■□□□ 1.42
TRAF4-207ENST00000461195 SOBPA7XYQ1 873 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 F8VP50 259 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 CLDN5O00501 218 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 NDST1P52848 882 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 STARD6P59095 220 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 TTI2Q6NXR4 508 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 CLEC17AQ6ZS10 378 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 DENND5BQ6ZUT9 1274 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 FILIP1Q7Z7B0 1213 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 ACOT1Q86TX2 421 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 GPIHBP1Q8IV16 184 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 YAF2Q8IY57 180 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 MAB21L3Q8N8X9 362 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 RSPRY1Q96DX4 576 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 DUSP9Q99956 384 aaKnown RBP23.93■■□□□ 1.42
TRAF4-207ENST00000461195 METTL14Q9HCE5 456 aaKnown RBP23.93■■□□□ 1.42
TRAF4-207ENST00000461195 RAB20Q9NX57 234 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 OBP2AQ9NY56 170 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 EHD2Q9NZN4 543 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 CTNND2Q9UQB3 1225 aa23.93■■□□□ 1.42
TRAF4-207ENST00000461195 ZNF263O14978 683 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 PI15O43692 258 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 TRIM21P19474 475 aaKnown RBP23.92■■□□□ 1.42
TRAF4-207ENST00000461195 INCA1Q0VD86 236 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 TXNDC8Q6A555 127 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 FRMD5Q7Z6J6 570 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 CMTM8Q8IZV2 173 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 CRYBG2Q8N1P7 616 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 SEMA4DQ92854 862 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 MED10Q9BTT4 135 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 TRPV5Q9NQA5 729 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 HMGXB4Q9UGU5 601 aa23.92■■□□□ 1.42
TRAF4-207ENST00000461195 LRRN2O75325 713 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 TADA3O75528 432 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 PRAMEF12O95522 483 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 AVPR1AP37288 418 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 CACNA2D1P54289 1103 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 FCHO2Q0JRZ9 810 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 PAK1Q13153 545 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 CBWD6Q4V339 395 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 CBWD3Q5JTY5 395 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 CBWD5Q5RIA9 395 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 FAM35AQ86V20 835 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 MON1AQ86VX9 555 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 SLC35C1Q96A29 364 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 FAXDC2Q96IV6 333 aa23.91■■□□□ 1.42
TRAF4-207ENST00000461195 TICRRQ7Z2Z1 1910 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 ANAPC1Q9H1A4 1944 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 ZFHX2Q9C0A1 2572 aaPredicted RBP23.9■■□□□ 1.42
TRAF4-207ENST00000461195 CHADO15335 359 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 ORC1Q13415 861 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 CCDC40Q4G0X9 1142 aa23.9■■□□□ 1.42
TRAF4-207ENST00000461195 WDR44Q5JSH3 913 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms