RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 P2RY13Q9BPV8 354 aa11.72□□□□□ -0.53
VAMP7-203ENST00000460621 MRPL45Q9BRJ2 306 aaKnown RBP11.72□□□□□ -0.53
VAMP7-203ENST00000460621 DUSP15Q9H1R2 295 aaPredicted RBP11.72□□□□□ -0.53
VAMP7-203ENST00000460621 TRPC7Q9HCX4 862 aa11.72□□□□□ -0.53
VAMP7-203ENST00000460621 ABCB6Q9NP58 842 aa11.72□□□□□ -0.53
VAMP7-203ENST00000460621 CCDC39Q9UFE4 941 aa11.72□□□□□ -0.53
VAMP7-203ENST00000460621 ITGA11Q9UKX5 1188 aa11.72□□□□□ -0.53
VAMP7-203ENST00000460621 EXOC7Q9UPT5 735 aa11.72□□□□□ -0.53
VAMP7-203ENST00000460621 MYO16Q9Y6X6 1858 aa11.72□□□□□ -0.53
VAMP7-203ENST00000460621 SOBPA7XYQ1 873 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 TGFB1I1O43294 461 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 PDGFRBP09619 1106 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 ZNF806P0C7X5 589 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 BDNFP23560 247 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 OPRD1P41143 372 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 FAM160A1Q05DH4 1040 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 PDGFRLQ15198 375 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 PLK5Q496M5 336 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 EPM2AIP1Q7L775 607 aaPredicted RBP11.71□□□□□ -0.53
VAMP7-203ENST00000460621 CACNA2D4Q7Z3S7 1137 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 SCN4BQ8IWT1 228 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 SYCP3Q8IZU3 236 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 GPD1LQ8N335 351 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 TTC16Q8NEE8 873 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 RPLP0P6Q8NHW5 317 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 SH3RF2Q8TEC5 729 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 NOC3LQ8WTT2 800 aaKnown RBP11.71□□□□□ -0.53
VAMP7-203ENST00000460621 CACTINQ8WUQ7 758 aaKnown RBP11.71□□□□□ -0.53
VAMP7-203ENST00000460621 OSCP1Q8WVF1 389 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 ZNF516Q92618 1163 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 ELMO3Q96BJ8 720 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 HPDLQ96IR7 371 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 ZC3H10Q96K80 434 aaKnown RBP11.71□□□□□ -0.53
VAMP7-203ENST00000460621 RNF38Q9H0F5 515 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 KIF9Q9HAQ2 790 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 DUS2Q9NX74 493 aaKnown RBP11.71□□□□□ -0.53
VAMP7-203ENST00000460621 ZMYM5Q9UJ78 669 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 INVSQ9Y283 1065 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
VAMP7-203ENST00000460621 MORC2Q9Y6X9 1032 aaPredicted RBP11.71□□□□□ -0.53
VAMP7-203ENST00000460621 KIAA1549LQ6ZVL6 1849 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 CCDC163A0A0D9SF12 145 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 K7EQS6 105 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 SCAMP3O14828 347 aaKnown RBP11.7□□□□□ -0.54
VAMP7-203ENST00000460621 LDHAP00338 332 aaKnown RBP11.7□□□□□ -0.54
VAMP7-203ENST00000460621 DRD1P21728 446 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 CASP1P29466 404 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 STAT6P42226 847 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 MAGEA11P43364 429 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 SLC6A11P48066 632 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 LHX1P48742 406 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 NASPP49321 788 aaPredicted RBP11.7□□□□□ -0.54
VAMP7-203ENST00000460621 RPL10AP62906 217 aaKnown RBP11.7□□□□□ -0.54
VAMP7-203ENST00000460621 MYL7Q01449 175 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 N4BP2L1Q5TBK1 243 aaPredicted RBP11.7□□□□□ -0.54
VAMP7-203ENST00000460621 CCDC73Q6ZRK6 1079 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 SPATA2LQ8IUW3 424 aaPredicted RBP11.7□□□□□ -0.54
VAMP7-203ENST00000460621 PLEKHO2Q8TD55 490 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 SYT15Q9BQS2 421 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 KBTBD4Q9NVX7 518 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 HSPBP1Q9NZL4 362 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 SLC8A2Q9UPR5 921 aa11.7□□□□□ -0.54
VAMP7-203ENST00000460621 PTPRDP23468 1912 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 TRAV19A0A0A6YYK7 116 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 USP17L7P0C7H9 530 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 HDCP19113 662 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 WARSP23381 471 aaKnown RBP11.69□□□□□ -0.54
VAMP7-203ENST00000460621 LIMK1P53667 647 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 DMC1Q14565 340 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 CC2D1AQ6P1N0 951 aaPredicted RBP11.69□□□□□ -0.54
VAMP7-203ENST00000460621 SHC4Q6S5L8 630 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 SYT13Q7L8C5 426 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 TRAPPC11Q7Z392 1133 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 CAMKK1Q8N5S9 505 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 RDH13Q8NBN7 331 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 LINC00301Q8NCQ3 95 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 SPATA18Q8TC71 538 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 ZNF507Q8TCN5 953 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 USP33Q8TEY7 942 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 CD101Q93033 1021 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 PCED1BQ96HM7 432 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 FUBP3Q96I24 572 aaKnown RBP eCLIP11.69□□□□□ -0.54
VAMP7-203ENST00000460621 LOXL4Q96JB6 756 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 TTLL2Q9BWV7 592 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 DPEP3Q9H4B8 488 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 TMEM206Q9H813 350 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 TFIP11Q9UBB9 837 aaKnown RBP11.69□□□□□ -0.54
VAMP7-203ENST00000460621 MAGEC2Q9UBF1 373 aaPredicted RBP11.69□□□□□ -0.54
VAMP7-203ENST00000460621 UXTQ9UBK9 157 aaPredicted RBP11.69□□□□□ -0.54
VAMP7-203ENST00000460621 ARHGAP26Q9UNA1 814 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 MYOFQ9NZM1 2061 aa11.69□□□□□ -0.54
VAMP7-203ENST00000460621 CEP295Q9C0D2 2601 aa11.68□□□□□ -0.54
VAMP7-203ENST00000460621 ZNF840PA6NDX5 716 aa11.68□□□□□ -0.54
VAMP7-203ENST00000460621 ZNF233A6NK53 670 aa11.68□□□□□ -0.54
VAMP7-203ENST00000460621 LEFTY2O00292 366 aa11.68□□□□□ -0.54
VAMP7-203ENST00000460621 CLDN5O00501 218 aa11.68□□□□□ -0.54
VAMP7-203ENST00000460621 CLIC2O15247 247 aa11.68□□□□□ -0.54
VAMP7-203ENST00000460621 ATG13O75143 517 aa11.68□□□□□ -0.54
VAMP7-203ENST00000460621 CKMP06732 381 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms