RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 HYAL1Q12794 435 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 DUSP4Q13115 394 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 CNGA2Q16280 664 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 LILRA6Q6PI73 481 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 ELMSAN1Q6PJG2 1045 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 LCLAT1Q6UWP7 414 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 CCDC149Q6ZUS6 474 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 PAQR9Q6ZVX9 377 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 IRF2BP2Q7Z5L9 587 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 TTC30AQ86WT1 665 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 ZNF677Q86XU0 584 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 PASD1Q8IV76 773 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 SCN4BQ8IWT1 228 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 TC2NQ8N9U0 490 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 SLC7A14Q8TBB6 771 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 SLC22A17Q8WUG5 538 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 DMAP1Q9NPF5 467 aaPredicted RBP10.78□□□□□ -0.68
UPF2-204ENST00000460569 MAN1C1Q9NR34 630 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 SEPT11Q9NVA2 429 aaKnown RBP10.78□□□□□ -0.68
UPF2-204ENST00000460569 MAFFQ9ULX9 164 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 SLC27A5Q9Y2P5 690 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 YIPF1Q9Y548 306 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 INSL5Q9Y5Q6 135 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 HCFC2Q9Y5Z7 792 aa10.78□□□□□ -0.68
UPF2-204ENST00000460569 F8VP50 259 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 TRIM66O15016 1216 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 SOAT2O75908 522 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 SERPING1P05155 500 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 C8AP07357 584 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 MMEP08473 750 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 CFHP08603 1231 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 FOSL2P15408 326 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 POU3F3P20264 500 aaPredicted RBP10.77□□□□□ -0.69
UPF2-204ENST00000460569 ANXA13P27216 316 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 HNRNPH3P31942 346 aaKnown RBP10.77□□□□□ -0.69
UPF2-204ENST00000460569 GRIK1P39086 918 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 CACNA2D1P54289 1103 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 MAP3K7CLP57077 242 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 SLC8A3P57103 927 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 GSDMDP57764 484 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 RBM10P98175 930 aaKnown RBP10.77□□□□□ -0.69
UPF2-204ENST00000460569 CDR2Q01850 454 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 BST2Q10589 180 aaKnown RBP10.77□□□□□ -0.69
UPF2-204ENST00000460569 ARID5BQ14865 1188 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 HGSNATQ68CP4 663 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 DENND1BQ6P3S1 775 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 VSTM1Q6UX27 236 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 CLEC20AQ6ZU45 233 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 TCEAL8Q8IYN2 117 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 ANKRD52Q8NB46 1076 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 UBA3Q8TBC4 463 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 DDX1Q92499 740 aaKnown RBP10.77□□□□□ -0.69
UPF2-204ENST00000460569 GUCD1Q96NT3 240 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 CDX2Q99626 313 aaPredicted RBP10.77□□□□□ -0.69
UPF2-204ENST00000460569 AGPAT1Q99943 283 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 DUSP16Q9BY84 665 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 PLEKHA4Q9H4M7 779 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 HAUS4Q9H6D7 363 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 HSFX1Q9UBD0 423 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 PCDHGC3Q9UN70 934 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 CEP83Q9Y592 693 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 BZW2Q9Y6E2 419 aaKnown RBP10.77□□□□□ -0.69
UPF2-204ENST00000460569 GREB1Q4ZG55 1949 aa10.77□□□□□ -0.69
UPF2-204ENST00000460569 CDH23Q9H251 3354 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 FAM170AA1A519 330 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 LINC01565O15544 149 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 BEST1O76090 585 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 C1RP00736 705 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 LRG1P02750 347 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 PLEKP08567 350 aaPredicted RBP10.76□□□□□ -0.69
UPF2-204ENST00000460569 SETSIPP0DME0 302 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 SRGAP2BP0DMP2 458 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 CHRNB2P17787 502 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 TNFAIP3P21580 790 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 ALDH1A3P47895 512 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 TUFMP49411 452 aaKnown RBP10.76□□□□□ -0.69
UPF2-204ENST00000460569 GPR15P49685 360 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 RPL10AP62906 217 aaKnown RBP10.76□□□□□ -0.69
UPF2-204ENST00000460569 FMO1Q01740 532 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 PDE4CQ08493 712 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 TWF1Q12792 350 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 PLD1Q13393 1074 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 MEA1Q16626 185 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 DDR2Q16832 855 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 PKDCCQ504Y2 493 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 PPM1LQ5SGD2 360 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 SDHAF4Q5VUM1 108 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 WDR59Q6PJI9 974 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 TRIM72Q6ZMU5 477 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 CCDC186Q7Z3E2 898 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 ZNF571Q7Z3V5 609 aaPredicted RBP10.76□□□□□ -0.69
UPF2-204ENST00000460569 VPS36Q86VN1 386 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 EFHBQ8N7U6 833 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 C1orf131Q8NDD1 294 aaKnown RBP10.76□□□□□ -0.69
UPF2-204ENST00000460569 STKLD1Q8NE28 680 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 VN1R2Q8NFZ6 395 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 CASP10Q92851 521 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 SECISBP2LQ93073 1101 aaKnown RBP10.76□□□□□ -0.69
UPF2-204ENST00000460569 PANX2Q96RD6 677 aa10.76□□□□□ -0.69
UPF2-204ENST00000460569 KCNK16Q96T55 309 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms