RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 OSBPL6Q9BZF3 934 aa24.5■■□□□ 1.51
PTPN4-208ENST00000460289 ELOVL4Q9GZR5 314 aa24.5■■□□□ 1.51
PTPN4-208ENST00000460289 TMEM8AQ9HCN3 771 aa24.5■■□□□ 1.51
PTPN4-208ENST00000460289 HEBP1Q9NRV9 189 aa24.5■■□□□ 1.51
PTPN4-208ENST00000460289 PSMA7O14818 248 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 CHADO15335 359 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 ANKRD40Q6AI12 368 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 SCARA5Q6ZMJ2 495 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 ZNF852Q6ZMS4 543 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 TPRG1Q6ZUI0 275 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 DENND5BQ6ZUT9 1274 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 MON1AQ86VX9 555 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 CELF5Q8N6W0 485 aaKnown RBP24.49■■□□□ 1.51
PTPN4-208ENST00000460289 MAB21L3Q8N8X9 362 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 DTWD2Q8NBA8 298 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 STKLD1Q8NE28 680 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 PJA1Q8NG27 643 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 RSPRY1Q96DX4 576 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 EEF2KMTQ96G04 330 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 DHTKD1Q96HY7 919 aaPredicted RBP24.49■■□□□ 1.51
PTPN4-208ENST00000460289 C8orf48Q96LL4 319 aa24.49■■□□□ 1.51
PTPN4-208ENST00000460289 MRPS17Q9Y2R5 130 aaKnown RBP24.49■■□□□ 1.51
PTPN4-208ENST00000460289 MAN2B1O00754 1011 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 SLC16A3O15427 465 aaKnown RBP24.48■■□□□ 1.51
PTPN4-208ENST00000460289 TRIM21P19474 475 aaKnown RBP24.48■■□□□ 1.51
PTPN4-208ENST00000460289 RAP1GAPP47736 663 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 UNC93AQ86WB7 457 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 BPIFB1Q8TDL5 484 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 TAS1R2Q8TE23 839 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 ELMO3Q96BJ8 720 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 B3GNT5Q9BYG0 378 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 FOXQ1Q9C009 403 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 MMRN2Q9H8L6 949 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 THG1LQ9NWX6 298 aaKnown RBP24.48■■□□□ 1.51
PTPN4-208ENST00000460289 MAN1B1Q9UKM7 699 aa24.48■■□□□ 1.51
PTPN4-208ENST00000460289 ATP8B3O60423 1300 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 H0Y858 1186 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 GLULP15104 373 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 CCNE1P24864 410 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 MLLT6P55198 1093 aaPredicted RBP24.47■■□□□ 1.51
PTPN4-208ENST00000460289 UBE2HP62256 183 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 ARHGAP29Q52LW3 1261 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 TXNDC8Q6A555 127 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 ISM2Q6H9L7 571 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 SPOPLQ6IQ16 392 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 ZC3H3Q8IXZ2 948 aaKnown RBP24.47■■□□□ 1.51
PTPN4-208ENST00000460289 CSGALNACT1Q8TDX6 532 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 ATOH1Q92858 354 aaPredicted RBP24.47■■□□□ 1.51
PTPN4-208ENST00000460289 SDCBP2Q9H190 292 aa24.47■■□□□ 1.51
PTPN4-208ENST00000460289 NCANO14594 1321 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 FAM170BA6NMN3 283 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 F8VP50 259 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 NCAM2O15394 837 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 PRAMEF12O95522 483 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 DCNP07585 359 aaKnown RBP24.46■■□□□ 1.51
PTPN4-208ENST00000460289 ASPAP45381 313 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 PMS1P54277 932 aaKnown RBP24.46■■□□□ 1.51
PTPN4-208ENST00000460289 NOP14P78316 857 aaKnown RBP24.46■■□□□ 1.51
PTPN4-208ENST00000460289 PLCB2Q00722 1185 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 UBXN2BQ14CS0 331 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 CRYBG2Q8N1P7 616 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 LRRC3BQ96PB8 259 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 ZNF518BQ9C0D4 1074 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 DNAI2Q9GZS0 605 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 KIF9Q9HAQ2 790 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 CYP3A43Q9HB55 503 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 LTB4R2Q9NPC1 389 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 TDP1Q9NUW8 608 aa24.46■■□□□ 1.51
PTPN4-208ENST00000460289 ARNTLO00327 626 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 CD72P21854 359 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 PPP3CCP48454 512 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 MXI1P50539 228 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 NDST1P52848 882 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 ACOT1Q86TX2 421 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 FBXL13Q8NEE6 735 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 FAXDC2Q96IV6 333 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 MED10Q9BTT4 135 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 BCO2Q9BYV7 579 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 DLGAP2Q9P1A6 1054 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 PIAS3Q9Y6X2 628 aa24.45■■□□□ 1.5
PTPN4-208ENST00000460289 TRIM49BA6NDI0 452 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 CLDN5O00501 218 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 TADA3O75528 432 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 MAGEA9P43362 315 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 MORC3Q14149 939 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 ZNF268Q14587 947 aaPredicted RBP24.44■■□□□ 1.5
PTPN4-208ENST00000460289 TCERG1LQ5VWI1 586 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 C1orf228Q6PIY5 440 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 USP13Q92995 863 aaPredicted RBP24.44■■□□□ 1.5
PTPN4-208ENST00000460289 MSANTD3Q96H12 275 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 TTLL2Q9BWV7 592 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 NIF3L1Q9GZT8 377 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 SMG9Q9H0W8 520 aaKnown RBP24.44■■□□□ 1.5
PTPN4-208ENST00000460289 APOBEC3GQ9HC16 384 aaKnown RBP24.44■■□□□ 1.5
PTPN4-208ENST00000460289 METTL14Q9HCE5 456 aaKnown RBP24.44■■□□□ 1.5
PTPN4-208ENST00000460289 TRPC7Q9HCX4 862 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.44■■□□□ 1.5
PTPN4-208ENST00000460289 RAB20Q9NX57 234 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 TRPM5Q9NZQ8 1165 aa24.44■■□□□ 1.5
PTPN4-208ENST00000460289 ARMCX3Q9UH62 379 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms