RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 GPR152Q8TDT2 470 aa15.92■□□□□ 0.14
ATG4B-213ENST00000460211 SMARCD2Q92925 531 aa15.92■□□□□ 0.14
ATG4B-213ENST00000460211 E2F7Q96AV8 911 aa15.92■□□□□ 0.14
ATG4B-213ENST00000460211 ELSPBP1Q96BH3 223 aa15.92■□□□□ 0.14
ATG4B-213ENST00000460211 PCED1BQ96HM7 432 aa15.92■□□□□ 0.14
ATG4B-213ENST00000460211 FAXDC2Q96IV6 333 aa15.92■□□□□ 0.14
ATG4B-213ENST00000460211 NUP62CLQ9H1M0 184 aa15.92■□□□□ 0.14
ATG4B-213ENST00000460211 RAB20Q9NX57 234 aa15.92■□□□□ 0.14
ATG4B-213ENST00000460211 WNT16Q9UBV4 365 aa15.92■□□□□ 0.14
ATG4B-213ENST00000460211 DOCK8Q8NF50 2099 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 KRBA1A5PL33 1030 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 TRIM66O15016 1216 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 MOSPD3O75425 235 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 RAP1GAPP47736 663 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 PFKPQ01813 784 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 CETN1Q12798 172 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 FAM78AQ5JUQ0 283 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 SPOPLQ6IQ16 392 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 TTC39CQ8N584 583 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 MLKLQ8NB16 471 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 ST13P5Q8NFI4 369 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-213ENST00000460211 ZSCAN18Q8TBC5 510 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-213ENST00000460211 ASB16Q96NS5 453 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 DUSP9Q99956 384 aaKnown RBP15.91■□□□□ 0.14
ATG4B-213ENST00000460211 KXD1Q9BQD3 176 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 ELOVL4Q9GZR5 314 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 NIF3L1Q9GZT8 377 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 ZNF334Q9HCZ1 680 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-213ENST00000460211 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.91■□□□□ 0.14
ATG4B-213ENST00000460211 LMBRD1Q9NUN5 540 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 MAGED2Q9UNF1 606 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-213ENST00000460211 R4GN57 208 aa15.91■□□□□ 0.14
ATG4B-213ENST00000460211 ZNF292O60281 2723 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 SLC38A8A6NNN8 435 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 DPYSL4O14531 572 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 GPR15P49685 360 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 NDST1P52848 882 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 STX17P56962 302 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 GPR158Q5T848 1215 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 SDHAF4Q5VUM1 108 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 TANGO2Q6ICL3 276 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 GAREM2Q75VX8 874 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 MRPS31Q92665 395 aaKnown RBP15.9■□□□□ 0.14
ATG4B-213ENST00000460211 ELMO3Q96BJ8 720 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 SPATA17Q96L03 361 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 MED10Q9BTT4 135 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 RPP25Q9BUL9 199 aaKnown RBP15.9■□□□□ 0.14
ATG4B-213ENST00000460211 SRRTQ9BXP5 876 aaKnown RBP15.9■□□□□ 0.14
ATG4B-213ENST00000460211 DPEP3Q9H4B8 488 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 TASP1Q9H6P5 420 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 SLC2A4RGQ9NR83 387 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 DACH1Q9UI36 760 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 RWDD2AQ9UIY3 292 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 DMXL1Q9Y485 3027 aa15.9■□□□□ 0.14
ATG4B-213ENST00000460211 NOTCH4Q99466 2003 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 SOBPA7XYQ1 873 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 NOL4O94818 638 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 CCDC192P0DO97 292 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 HMGA1P17096 107 aaKnown RBP15.89■□□□□ 0.13
ATG4B-213ENST00000460211 DDX6P26196 483 aaKnown RBP eCLIP15.89■□□□□ 0.13
ATG4B-213ENST00000460211 ASPAP45381 313 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 GPC5P78333 572 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 CCDC142Q17RM4 750 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 ACOT1Q86TX2 421 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 KIAA2013Q8IYS2 634 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 CRYBG2Q8N1P7 616 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 DEPDC1BQ8WUY9 529 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 SLC35C1Q96A29 364 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 TRMT2BQ96GJ1 504 aaKnown RBP15.89■□□□□ 0.13
ATG4B-213ENST00000460211 C8orf48Q96LL4 319 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 MYRFLQ96LU7 910 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 ZSWIM3Q96MP5 696 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 NT5C1AQ9BXI3 368 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 BCO2Q9BYV7 579 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 SDCBP2Q9H190 292 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 FAM124BQ9H5Z6 455 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-213ENST00000460211 TBC1D17Q9HA65 648 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 TRPV4Q9HBA0 871 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 IL21Q9HBE4 155 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 APOBEC3GQ9HC16 384 aaKnown RBP15.89■□□□□ 0.13
ATG4B-213ENST00000460211 NME7Q9Y5B8 376 aa15.89■□□□□ 0.13
ATG4B-213ENST00000460211 LMNAP02545 664 aaKnown RBP15.88■□□□□ 0.13
ATG4B-213ENST00000460211 DCNP07585 359 aaKnown RBP15.88■□□□□ 0.13
ATG4B-213ENST00000460211 NLRP12P59046 1061 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 INCA1Q0VD86 236 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 TPD52L1Q16890 204 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-213ENST00000460211 CBWD6Q4V339 395 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 CBWD3Q5JTY5 395 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 CBWD5Q5RIA9 395 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 DENND5BQ6ZUT9 1274 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 ARID3BQ8IVW6 561 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-213ENST00000460211 YAF2Q8IY57 180 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 SEMA4DQ92854 862 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 RMDN1Q96DB5 314 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 SHDQ96IW2 340 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 TRMT61BQ9BVS5 477 aaKnown RBP15.88■□□□□ 0.13
ATG4B-213ENST00000460211 B3GNT5Q9BYG0 378 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 COQ4Q9Y3A0 265 aa15.88■□□□□ 0.13
ATG4B-213ENST00000460211 FRYLO94915 3013 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms