RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 TGFB1I1O43294 461 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 PECAM1P16284 738 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-203ENST00000460097 EIF4BP23588 611 aaKnown RBP16.6■□□□□ 0.25
CMTM3-203ENST00000460097 RASSF2P50749 326 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 PPARDQ03181 441 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 ZNF211Q13398 564 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-203ENST00000460097 SETDB1Q15047 1291 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 CNKSR3Q6P9H4 555 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 OTOP2Q7RTS6 562 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 TMEM40Q8WWA1 233 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 SEPT8Q92599 483 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 PRCCQ92733 491 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-203ENST00000460097 KIFAP3Q92845 792 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 TGS1Q96RS0 853 aaKnown RBP16.6■□□□□ 0.25
CMTM3-203ENST00000460097 FDXACB1Q9BRP7 624 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-203ENST00000460097 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 PLVAPQ9BX97 442 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 GCOM2Q9BZD3 368 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-203ENST00000460097 INTS2Q9H0H0 1204 aaKnown RBP16.6■□□□□ 0.25
CMTM3-203ENST00000460097 PRO3102Q9H379 93 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 AGO3Q9H9G7 860 aaKnown RBP16.6■□□□□ 0.25
CMTM3-203ENST00000460097 AAASQ9NRG9 546 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 TANC1Q9C0D5 1861 aa16.6■□□□□ 0.25
CMTM3-203ENST00000460097 SMIM23A6NLE4 172 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 CDH16O75309 829 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 SNUPNO95149 360 aaKnown RBP16.59■□□□□ 0.25
CMTM3-203ENST00000460097 ABHD2P08910 425 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 DARSP14868 501 aaKnown RBP16.59■□□□□ 0.25
CMTM3-203ENST00000460097 GLRA2P23416 452 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 CASP4P49662 377 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 TFDP1Q14186 410 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 SHHQ15465 462 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 ODR4Q5SWX8 454 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 GJB7Q6PEY0 223 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 ZDHHC14Q8IZN3 488 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 RNF149Q8NC42 400 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 ASAP3Q8TDY4 903 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 APBB2Q92870 758 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 INO80BQ9C086 356 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-203ENST00000460097 TLE6Q9H808 572 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 NKIRAS1Q9NYS0 192 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 LOXHD1Q8IVV2 1947 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 FSCN2O14926 492 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 GPR182O15218 404 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 TP73O15350 636 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 TBCAO75347 108 aaKnown RBP16.59■□□□□ 0.25
CMTM3-203ENST00000460097 DCTN3O75935 186 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 ABCB4P21439 1286 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 CD52P31358 61 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 STX2P32856 288 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 SLCO1A2P46721 670 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 IL9RQ01113 521 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-203ENST00000460097 POU5F1BQ06416 359 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 NFX1Q12986 1120 aaKnown RBP16.59■□□□□ 0.25
CMTM3-203ENST00000460097 IKBKEQ14164 716 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 C9orf50Q5SZB4 431 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 CGB2Q6NT52 195 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 STXBP4Q6ZWJ1 553 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 ECHDC2Q86YB7 292 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 CCDC105Q8IYK2 499 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 BBOF1Q8ND07 529 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 UTP4Q969X6 686 aaKnown RBP16.59■□□□□ 0.25
CMTM3-203ENST00000460097 RMDN2Q96LZ7 410 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 OSBPL1AQ9BXW6 950 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 CCDC113Q9H0I3 377 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 IFT122Q9HBG6 1241 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 EURLQ9NYK6 297 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 PADI3Q9ULW8 664 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-203ENST00000460097 USH1CQ9Y6N9 552 aa16.59■□□□□ 0.25
CMTM3-203ENST00000460097 TET1Q8NFU7 2136 aa16.58■□□□□ 0.25
CMTM3-203ENST00000460097 PMM2O15305 246 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 PEX11AO75192 247 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 TPBGLP0DKB5 382 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 BRAFP15056 766 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 TAC1P20366 129 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 ROR2Q01974 943 aaKnown RBP16.58■□□□□ 0.24
CMTM3-203ENST00000460097 PTK6Q13882 451 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 CAPSQ13938 189 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 STAT4Q14765 748 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 TDHQ8IZJ6 230 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 KIF2BQ8N4N8 673 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 ZNF398Q8TD17 642 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 GRK7Q8WTQ7 553 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 HERVK_113Q902F9 699 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 KRT35Q92764 455 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 CCDC77Q9BR77 488 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 MTIF3Q9H2K0 278 aaKnown RBP16.58■□□□□ 0.24
CMTM3-203ENST00000460097 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 ETNK1Q9HBU6 452 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 CTTNBP2NLQ9P2B4 639 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 ST3GAL5Q9UNP4 418 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 ZMYM2Q9UBW7 1377 aa16.58■□□□□ 0.24
CMTM3-203ENST00000460097 ABHD14A-ACY1A0A1B0GW23 586 aa16.57■□□□□ 0.24
CMTM3-203ENST00000460097 LRRD1A4D1F6 860 aa16.57■□□□□ 0.24
CMTM3-203ENST00000460097 A8MUI8 341 aa16.57■□□□□ 0.24
CMTM3-203ENST00000460097 MAPK13O15264 365 aa16.57■□□□□ 0.24
CMTM3-203ENST00000460097 SKAP2O75563 359 aaPredicted RBP16.57■□□□□ 0.24
CMTM3-203ENST00000460097 BAIAP3O94812 1187 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms