RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 MTSS1LQ765P7 747 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 UBALD2Q8IYN6 164 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 CRYBG2Q8N1P7 616 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 ENOX1Q8TC92 643 aaKnown RBP23.12■■□□□ 1.29
SSNA1-202ENST00000459860 GPR152Q8TDT2 470 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 TATDN2Q93075 761 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 TCEAL4Q96EI5 215 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 SMOC2Q9H3U7 446 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 SLITRK6Q9H5Y7 841 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 CISHQ9NSE2 258 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 EHD2Q9NZN4 543 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 UXTQ9UBK9 157 aaPredicted RBP23.12■■□□□ 1.29
SSNA1-202ENST00000459860 HMGXB4Q9UGU5 601 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 MAGED2Q9UNF1 606 aaPredicted RBP23.12■■□□□ 1.29
SSNA1-202ENST00000459860 NFE2L3Q9Y4A8 694 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 ZDBF2Q9HCK1 2354 aa23.12■■□□□ 1.29
SSNA1-202ENST00000459860 GABRR2P28476 465 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 CCR2P41597 374 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 MTMR3Q13615 1198 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 MAN2A1Q16706 1144 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 ARHGAP15Q53QZ3 475 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 SDHAF4Q5VUM1 108 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 FAM35AQ86V20 835 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 IRF2BP1Q8IU81 584 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 MCRS1Q96EZ8 462 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 SMARCD1Q96GM5 515 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 LRRC3Q9BY71 257 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 B3GNT5Q9BYG0 378 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 ZNF518BQ9C0D4 1074 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 GPR88Q9GZN0 384 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 NAT10Q9H0A0 1025 aaKnown RBP23.11■■□□□ 1.29
SSNA1-202ENST00000459860 ATXN3LQ9H3M9 355 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 GCNT4Q9P109 453 aa23.11■■□□□ 1.29
SSNA1-202ENST00000459860 GREB1Q4ZG55 1949 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 A0A1W2PRU2 124 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 SLC38A8A6NNN8 435 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 LETM1O95202 739 aaPredicted RBP23.1■■□□□ 1.29
SSNA1-202ENST00000459860 ASGR2P07307 311 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 PRKCSHP14314 528 aaPredicted RBP23.1■■□□□ 1.29
SSNA1-202ENST00000459860 TYRO3Q06418 890 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 HSP90AA4PQ58FG1 418 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 PPM1KQ8N3J5 372 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 EHBP1Q8NDI1 1231 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 SHKBP1Q8TBC3 707 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 SPATA17Q96L03 361 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 ARID3AQ99856 593 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 KCNK12Q9HB15 430 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 ZNF334Q9HCZ1 680 aaPredicted RBP23.1■■□□□ 1.29
SSNA1-202ENST00000459860 FAM49BQ9NUQ9 324 aa23.1■■□□□ 1.29
SSNA1-202ENST00000459860 OBSL1O75147 1896 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 KCNJ18B7U540 433 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 F8VP50 259 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 CLDN5O00501 218 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 NOL4O94818 638 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 GJA1P17302 382 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 EEF1GP26641 437 aaKnown RBP23.09■■□□□ 1.29
SSNA1-202ENST00000459860 KCNJ12Q14500 433 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 TEAD2Q15562 447 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 ZNF394Q53GI3 561 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 GBP6Q6ZN66 633 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 C11orf57Q6ZUT1 292 aaPredicted RBP23.09■■□□□ 1.29
SSNA1-202ENST00000459860 SLC2A14Q8TDB8 520 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 C8orf48Q96LL4 319 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 TWNKQ96RR1 684 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 TUBGCP2Q9BSJ2 902 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 INTS2Q9H0H0 1204 aaKnown RBP23.09■■□□□ 1.29
SSNA1-202ENST00000459860 DMAP1Q9NPF5 467 aaPredicted RBP23.09■■□□□ 1.29
SSNA1-202ENST00000459860 FAM86C1Q9NVL1 165 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 DENND4CQ5VZ89 1909 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 MYO10Q9HD67 2058 aa23.09■■□□□ 1.29
SSNA1-202ENST00000459860 PES1O00541 588 aaKnown RBP23.08■■□□□ 1.29
SSNA1-202ENST00000459860 AP1G2O75843 785 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 TPM2P07951 284 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 CCDC130P13994 396 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 NUBP1P53384 320 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 MYL5Q02045 173 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 TDGQ13569 410 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 HTR4Q13639 388 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 SKOR2Q2VWA4 1001 aaPredicted RBP23.08■■□□□ 1.29
SSNA1-202ENST00000459860 DENND5BQ6ZUT9 1274 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 TRMT2BQ96GJ1 504 aaKnown RBP23.08■■□□□ 1.29
SSNA1-202ENST00000459860 TMEM176AQ96HP8 235 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 KRT82Q9NSB4 513 aa23.08■■□□□ 1.29
SSNA1-202ENST00000459860 SAMSN1Q9NSI8 373 aaKnown RBP23.08■■□□□ 1.29
SSNA1-202ENST00000459860 NUP210Q8TEM1 1887 aaPredicted RBP23.08■■□□□ 1.29
SSNA1-202ENST00000459860 GTPBP10A4D1E9 387 aaKnown RBP23.07■■□□□ 1.28
SSNA1-202ENST00000459860 ANHXE9PGG2 379 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 MOSPD3O75425 235 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 FAM200BP0CF97 657 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 HMGA1P17096 107 aaKnown RBP23.07■■□□□ 1.28
SSNA1-202ENST00000459860 ADORA2BP29275 332 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 GAREM2Q75VX8 874 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 FUKQ8N0W3 1084 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 C12orf29Q8N999 325 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 STKLD1Q8NE28 680 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 ANKRD20A12PQ8NF67 263 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 LMO3Q8TAP4 145 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 WHAMMQ8TF30 809 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 CYFIP2Q96F07 1278 aa23.07■■□□□ 1.28
SSNA1-202ENST00000459860 FAM81BQ96LP2 452 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms