RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 TRAPPC12Q8WVT3 735 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 MIPEPQ99797 713 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 FOXP3Q9BZS1 431 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 NIF3L1Q9GZT8 377 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 ASCC2Q9H1I8 757 aaPredicted RBP14.83□□□□□ -0.03
SCFD1-203ENST00000458591 ACAD9Q9H845 621 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 SHOC2Q9UQ13 582 aa14.83□□□□□ -0.03
SCFD1-203ENST00000458591 STAM2O75886 525 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 NEBLO76041 1014 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 UBA1P22314 1058 aaKnown RBP14.83□□□□□ -0.04
SCFD1-203ENST00000458591 PSMC1P62191 440 aaKnown RBP14.83□□□□□ -0.04
SCFD1-203ENST00000458591 TRPC3Q13507 836 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 GNPTABQ3T906 1256 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 LRRC38Q5VT99 294 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 PPIL6Q8IXY8 311 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 RSAD2Q8WXG1 361 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 TRIM56Q9BRZ2 755 aaKnown RBP14.83□□□□□ -0.04
SCFD1-203ENST00000458591 SDCBP2Q9H190 292 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 DENND2DQ9H6A0 471 aaPredicted RBP14.83□□□□□ -0.04
SCFD1-203ENST00000458591 FBXO6Q9NRD1 293 aaPredicted RBP14.83□□□□□ -0.04
SCFD1-203ENST00000458591 ZFP69BQ9UJL9 534 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 GJA3Q9Y6H8 435 aa14.83□□□□□ -0.04
SCFD1-203ENST00000458591 WFS1O76024 890 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 ZNF699Q32M78 642 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 FAXCQ5TGI0 409 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 EEF1DP3Q658K8 133 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 CEP128Q6ZU80 1094 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 PRPF39Q86UA1 669 aaKnown RBP14.82□□□□□ -0.04
SCFD1-203ENST00000458591 MICALL2Q8IY33 904 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 SCYL3Q8IZE3 742 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 RNF149Q8NC42 400 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 PPP1R16BQ96T49 567 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 CALN1Q9BXU9 219 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 XYLT2Q9H1B5 865 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 ARL8BQ9NVJ2 186 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 SLC24A2Q9UI40 661 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 PSME4Q14997 1843 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 CFAP69A5D8W1 941 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 ATP2A1O14983 1001 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 HOXC6P09630 235 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 GNAZP19086 355 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 ELK3P41970 407 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 RAD23BP54727 409 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 ARL4CP56559 192 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 FAAP100Q0VG06 881 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 STXBP2Q15833 593 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 LY6KQ17RY6 165 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 CTC1Q2NKJ3 1217 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 ADGRD1Q6QNK2 874 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 RGS9BPQ6ZS82 235 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 WDR49Q8IV35 697 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 BANPQ8N9N5 519 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 KCTD6Q8NC69 237 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 PIWIL1Q96J94 861 aaKnown RBP14.82□□□□□ -0.04
SCFD1-203ENST00000458591 PEBP4Q96S96 227 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 TEX13BQ9BXU2 312 aa14.82□□□□□ -0.04
SCFD1-203ENST00000458591 COL11A1P12107 1806 aaPredicted RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 GRAP2O75791 330 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 ATP5HO75947 161 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 LUC7L3O95232 432 aaKnown RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 ERFP50548 548 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 EIF3EP60228 445 aaKnown RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 TAF11Q15544 211 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 TARBP2Q15633 366 aaKnown RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 SEPT7Q16181 437 aaKnown RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 TTC7BQ86TV6 843 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 CCDC33Q8N5R6 958 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 UBA3Q8TBC4 463 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 TTC17Q96AE7 1141 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 FAXDC2Q96IV6 333 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 FAM111AQ96PZ2 611 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 NUDCD1Q96RS6 583 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 ACO2Q99798 780 aaKnown RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 ZNF395Q9H8N7 513 aaPredicted RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 DDX56Q9NY93 547 aaKnown RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 HEY2Q9UBP5 337 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 ADAMTS5Q9UNA0 930 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 ABLIM1O14639 778 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 BGNP21810 368 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 MIPP30301 263 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 TCF7P36402 384 aaPredicted RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 STAT5BP51692 787 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 DPYSL3Q14195 570 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 DUOXA2Q1HG44 320 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 PARP6Q2NL67 630 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 KBTBD12Q3ZCT8 623 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 CATSPERGQ6ZRH7 1159 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 CDHR3Q6ZTQ4 885 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 CLNKQ7Z7G1 428 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 ATP11CQ8NB49 1132 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 CDHR1Q96JP9 859 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 ANKRD27Q96NW4 1050 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 DHRS4Q9BTZ2 278 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 NIFKQ9BYG3 293 aaKnown RBP14.81□□□□□ -0.04
SCFD1-203ENST00000458591 ACSS3Q9H6R3 686 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 SMYD3Q9H7B4 428 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 SLC24A3Q9HC58 644 aa14.81□□□□□ -0.04
SCFD1-203ENST00000458591 KBTBD13C9JR72 458 aa14.8□□□□□ -0.04
SCFD1-203ENST00000458591 E5RJQ4 531 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms