RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 MTMR12Q9C0I1 747 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 ZFP69BQ9UJL9 534 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 DCTN4Q9UJW0 460 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 USTQ9Y2C2 406 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.25□□□□□ -0.13
TOP3B-213ENST00000457179 GLTPD2A6NH11 291 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 THAP12O43422 761 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 LMNAP02545 664 aaKnown RBP14.25□□□□□ -0.13
TOP3B-213ENST00000457179 CFHP08603 1231 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 WEE2P0C1S8 567 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 ABCD1P33897 745 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 CFAP157Q5JU67 520 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 ARMCX2Q7L311 632 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 HIC2Q96JB3 615 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 PDP2Q9P2J9 529 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 CPA4Q9UI42 421 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 ANAPC7Q9UJX3 599 aa14.25□□□□□ -0.13
TOP3B-213ENST00000457179 NOCTQ9UK39 431 aaKnown RBP14.25□□□□□ -0.13
TOP3B-213ENST00000457179 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 CXCL11O14625 94 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 DCTN3O75935 186 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 HLA-DRAP01903 254 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 LYNP07948 512 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 LAMTOR4Q0VGL1 99 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 ACVR2BQ13705 512 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 PPP2R5EQ16537 467 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 FASTKD5Q7L8L6 764 aaKnown RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 MTDHQ86UE4 582 aaKnown RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 PSPC1Q8WXF1 523 aaKnown RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 MCUR1Q96AQ8 359 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 SERPINB12Q96P63 405 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 ROPN1BQ9BZX4 212 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 ROPN1Q9HAT0 212 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 UBN1Q9NPG3 1134 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 ARHGAP28Q9P2N2 729 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 ASIC3Q9UHC3 531 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 PCDHB4Q9Y5E5 795 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 COL11A1P12107 1806 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 A6NJR5 290 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 RASA4BC9J798 803 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 BTBD19C9JJ37 291 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 RASA4O43374 803 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 CST3P01034 146 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 CETPP11597 493 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 DESP17661 470 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 YARSP54577 528 aaKnown RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 TDRD10Q5VZ19 366 aaKnown RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 FAM71AQ8IYT1 594 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 GATA6Q92908 595 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 PHACTR1Q9C0D0 580 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 FAM192AQ9GZU8 254 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 DHX33Q9H6R0 707 aaKnown RBP14.24□□□□□ -0.13
TOP3B-213ENST00000457179 TMEM8AQ9HCN3 771 aa14.24□□□□□ -0.13
TOP3B-213ENST00000457179 PTPN4P29074 926 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 CHRNA3P32297 505 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 SLC34A1Q06495 639 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 MAPK6Q16659 721 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 USP50Q70EL3 339 aaPredicted RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 USP37Q86T82 979 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 TMEM192Q8IY95 271 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 GPRC5AQ8NFJ5 357 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 RDM1Q8NG50 284 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 HELQQ8TDG4 1101 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 SNRNP27Q8WVK2 155 aaKnown RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 GRAMD1AQ96CP6 724 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 GPR20Q99678 358 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 CADM1Q9BY67 442 aaKnown RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 NPHS2Q9NP85 383 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 KLHL11Q9NVR0 708 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 KIAA1217Q5T5P2 1943 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 CFAP69A5D8W1 941 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 PODXLO00592 558 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 DRG2P55039 364 aaKnown RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 WDR4P57081 412 aaKnown RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 P3H1Q32P28 736 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 VPS52Q8N1B4 723 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 NMD3Q96D46 503 aaKnown RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 DDX27Q96GQ7 796 aaKnown RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 CPB2Q96IY4 423 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 CYTH2Q99418 400 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 ZNF184Q99676 751 aaPredicted RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 SENP7Q9BQF6 1050 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 C11orf70Q9BRQ4 267 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 MINDY3Q9H8M7 445 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 TTC7AQ9ULT0 858 aaPredicted RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 MCM3APO60318 1980 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 OPHN1O60890 802 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 INSRRP14616 1297 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 OCRLQ01968 901 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 PPIL2Q13356 520 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 MIPOL1Q8TD10 442 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 WDR60Q8WVS4 1066 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 DNAJC1Q96KC8 554 aaKnown RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 NTPCRQ9BSD7 190 aaKnown RBP14.23□□□□□ -0.13
TOP3B-213ENST00000457179 NAALADL1Q9UQQ1 740 aa14.23□□□□□ -0.13
TOP3B-213ENST00000457179 NFASCO94856 1347 aa14.22□□□□□ -0.13
TOP3B-213ENST00000457179 PSMG1O95456 288 aa14.22□□□□□ -0.13
TOP3B-213ENST00000457179 MAPK4P31152 587 aa14.22□□□□□ -0.13
TOP3B-213ENST00000457179 TTLL4Q14679 1199 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms