RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 AKAP3O75969 853 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 ARSAP15289 507 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 WARSP23381 471 aaKnown RBP9.42□□□□□ -0.9
PKP4-207ENST00000457109 GJA4P35212 333 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 ME1P48163 572 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 PXNP49023 591 aaPredicted RBP9.42□□□□□ -0.9
PKP4-207ENST00000457109 NASPP49321 788 aaPredicted RBP9.42□□□□□ -0.9
PKP4-207ENST00000457109 CYP2J2P51589 502 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 PSMC1P62191 440 aaKnown RBP9.42□□□□□ -0.9
PKP4-207ENST00000457109 DMWDQ09019 674 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 SNRNP35Q16560 246 aaKnown RBP9.42□□□□□ -0.9
PKP4-207ENST00000457109 WDR72Q3MJ13 1102 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 FAM26FQ5R3K3 315 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 FSTL4Q6MZW2 842 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 FAM171BQ6P995 826 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 NUDT18Q6ZVK8 323 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 TRAPPC11Q7Z392 1133 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 TMEM150AQ86TG1 271 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 CBWD2Q8IUF1 395 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 CEP57L1Q8IYX8 460 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 XXYLT1Q8NBI6 393 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 STKLD1Q8NE28 680 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 ZSWIM2Q8NEG5 633 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 GOLGA5Q8TBA6 731 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 MYCBPAPQ8TBZ2 947 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 ZNF507Q8TCN5 953 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 SH3RF2Q8TEC5 729 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 SYAP1Q96A49 352 aaPredicted RBP9.42□□□□□ -0.9
PKP4-207ENST00000457109 CHAMP1Q96JM3 812 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 SPATA17Q96L03 361 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 TRIM9Q9C026 710 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 DNAI2Q9GZS0 605 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 ARRDC1-AS1Q9H2J1 176 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 PARD6AQ9NPB6 346 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 HPS4Q9NQG7 708 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 CFAP45Q9UL16 551 aa9.42□□□□□ -0.9
PKP4-207ENST00000457109 MYH15Q9Y2K3 1946 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 EP300Q09472 2414 aaPredicted RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 A8MXQ7 604 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 SLC30A4O14863 429 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 CLIC2O15247 247 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 POLR2DO15514 142 aaKnown RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 ZBTB24O43167 697 aaPredicted RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 EXOC3O60645 756 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 ATP2C2O75185 946 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 ALDH1A2O94788 518 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 YEATS4O95619 227 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 APBB3O95704 486 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 EGFP01133 1207 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 P4HA1P13674 534 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 PTPN1P18031 435 aaKnown RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 LMO2P25791 158 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 ATICP31939 592 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 GBP1P32455 592 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 DGKEP52429 567 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 AP3M2P53677 418 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 WNT7BP56706 349 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 BIRC3Q13489 604 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 PSMD6Q15008 389 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 FOXD4L6Q3SYB3 417 aaPredicted RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 PREPLQ4J6C6 727 aaPredicted RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 USP39Q53GS9 565 aaKnown RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 MDH1BQ5I0G3 518 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 FOXD4L3Q6VB84 417 aaPredicted RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 C11orf74Q86VG3 221 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 OSTM1Q86WC4 334 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 DDX42Q86XP3 938 aaKnown RBP eCLIP9.41□□□□□ -0.9
PKP4-207ENST00000457109 HSCBQ8IWL3 235 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 NELFCDQ8IXH7 590 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 OR5B17Q8NGF7 314 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 RPLP0P6Q8NHW5 317 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 MYLPFQ96A32 169 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 CCDC47Q96A33 483 aaKnown RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 C7orf25Q9BPX7 421 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 MED10Q9BTT4 135 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 NACA2Q9H009 215 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 AGPAT3Q9NRZ7 376 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 KBTBD4Q9NVX7 518 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 NXF1Q9UBU9 619 aaKnown RBP9.41□□□□□ -0.9
PKP4-207ENST00000457109 SIX4Q9UIU6 781 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 ARHGAP26Q9UNA1 814 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 PCDHGA5Q9Y5G8 931 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 WNT6Q9Y6F9 365 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 VPS13AQ96RL7 3174 aa9.41□□□□□ -0.9
PKP4-207ENST00000457109 UBE4BO95155 1302 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 CITO14578 2027 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 DOCK6Q96HP0 2047 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 NOTCH4Q99466 2003 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 A0A087X0B3 334 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 PVALEFA0A1B0GWK0 134 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 C2orf78A6NCI8 922 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 TACC1O75410 805 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 RTN3O95197 1032 aaPredicted RBP9.4□□□□□ -0.9
PKP4-207ENST00000457109 CST3P01034 146 aaPredicted RBP9.4□□□□□ -0.9
PKP4-207ENST00000457109 ZNF806P0C7X5 589 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 TGM1P22735 817 aa9.4□□□□□ -0.9
PKP4-207ENST00000457109 IFRD2Q12894 506 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms