RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 BRD9Q9H8M2 597 aa24.66■■□□□ 1.54
CBX3-204ENST00000456948 CCDC192P0DO97 292 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 HMGA1P17096 107 aaKnown RBP24.65■■□□□ 1.54
CBX3-204ENST00000456948 WEE1P30291 646 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 AVPR1AP37288 418 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 ASPAP45381 313 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 GPR15P49685 360 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 NDST1P52848 882 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 SDHAF4Q5VUM1 108 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 ARID3BQ8IVW6 561 aaPredicted RBP24.65■■□□□ 1.54
CBX3-204ENST00000456948 CRYBG2Q8N1P7 616 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 FLCNQ8NFG4 579 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 NT5C1AQ9BXI3 368 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 BCO2Q9BYV7 579 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 IL21Q9HBE4 155 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 ARHGEF3Q9NR81 526 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 DACH1Q9UI36 760 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 CA14Q9ULX7 337 aa24.65■■□□□ 1.54
CBX3-204ENST00000456948 PDGFBP01127 241 aaPredicted RBP24.64■■□□□ 1.54
CBX3-204ENST00000456948 PPP3CCP48454 512 aa24.64■■□□□ 1.54
CBX3-204ENST00000456948 PDE6CP51160 858 aa24.64■■□□□ 1.54
CBX3-204ENST00000456948 NUBP1P53384 320 aa24.64■■□□□ 1.54
CBX3-204ENST00000456948 ASTLQ6HA08 431 aaPredicted RBP24.64■■□□□ 1.54
CBX3-204ENST00000456948 ACOT1Q86TX2 421 aa24.64■■□□□ 1.54
CBX3-204ENST00000456948 MFSD6LQ8IWD5 586 aa24.64■■□□□ 1.54
CBX3-204ENST00000456948 SMARCD1Q96GM5 515 aa24.64■■□□□ 1.54
CBX3-204ENST00000456948 DUSP9Q99956 384 aaKnown RBP24.64■■□□□ 1.54
CBX3-204ENST00000456948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.64■■□□□ 1.549e-6■□□□□ 10.3
CBX3-204ENST00000456948 OBP2AQ9NY56 170 aa24.64■■□□□ 1.54
CBX3-204ENST00000456948 RWDD2AQ9UIY3 292 aa24.64■■□□□ 1.54
CBX3-204ENST00000456948 ZDBF2Q9HCK1 2354 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 HEPACAM2A8MVW5 462 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 ZNF263O14978 683 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 F11P03951 625 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 STX17P56962 302 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 YWHAEP62258 255 aaKnown RBP24.63■■□□□ 1.53
CBX3-204ENST00000456948 PRKCQQ04759 706 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 INCA1Q0VD86 236 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 CCDC142Q17RM4 750 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 DNASE1L2Q92874 299 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 SLC35C1Q96A29 364 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 SRRTQ9BXP5 876 aaKnown RBP24.63■■□□□ 1.53
CBX3-204ENST00000456948 B3GNT5Q9BYG0 378 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 SDCBP2Q9H190 292 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 THG1LQ9NWX6 298 aaKnown RBP24.63■■□□□ 1.53
CBX3-204ENST00000456948 COQ4Q9Y3A0 265 aa24.63■■□□□ 1.53
CBX3-204ENST00000456948 F8VP50 259 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 FCARP24071 287 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 AVPR2P30518 371 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 VIPR2P41587 438 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 CYP4F8P98187 520 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 TPD52L1Q16890 204 aaPredicted RBP24.62■■□□□ 1.53
CBX3-204ENST00000456948 SLC44A4Q53GD3 710 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 IER5LQ5T953 404 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 MON1AQ86VX9 555 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 CMTM8Q8IZV2 173 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 CELF5Q8N6W0 485 aaKnown RBP24.62■■□□□ 1.53
CBX3-204ENST00000456948 ELMO3Q96BJ8 720 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 PLA2G2FQ9BZM2 168 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 APOBEC3GQ9HC16 384 aaKnown RBP24.62■■□□□ 1.53
CBX3-204ENST00000456948 LMBRD1Q9NUN5 540 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 TRPM5Q9NZQ8 1165 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 NME7Q9Y5B8 376 aa24.62■■□□□ 1.53
CBX3-204ENST00000456948 ZNF318Q5VUA4 2279 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 P4HA2O15460 535 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 RTN3O95197 1032 aaPredicted RBP24.61■■□□□ 1.53
CBX3-204ENST00000456948 CD58P19256 250 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 GDI1P31150 447 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 VCPP55072 806 aaKnown RBP24.61■■□□□ 1.53
CBX3-204ENST00000456948 CBWD6Q4V339 395 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 CBWD3Q5JTY5 395 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 CBWD5Q5RIA9 395 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 PHLDB3Q6NSJ2 640 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 NUP93Q8N1F7 819 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 MAB21L3Q8N8X9 362 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 SLITRK1Q96PX8 696 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 SLC46A2Q9BY10 475 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 ZNF518BQ9C0D4 1074 aa24.61■■□□□ 1.53
CBX3-204ENST00000456948 DMAP1Q9NPF5 467 aaPredicted RBP24.61■■□□□ 1.53
CBX3-204ENST00000456948 TRAV19A0A0A6YYK7 116 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 PMM2O15305 246 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 PFKLP17858 780 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 FMO5P49326 533 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 GRM2Q14416 872 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 MLF2Q15773 248 aaPredicted RBP24.6■■□□□ 1.53
CBX3-204ENST00000456948 STXBP5Q5T5C0 1151 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 POTEHQ6S545 545 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 VITQ6UXI7 678 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 FAM35AQ86V20 835 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 CSGALNACT1Q8TDX6 532 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 SEMA4DQ92854 862 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 KIF9Q9HAQ2 790 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 TRPV5Q9NQA5 729 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 COMMD8Q9NX08 183 aa24.6■■□□□ 1.53
CBX3-204ENST00000456948 MRPS17Q9Y2R5 130 aaKnown RBP24.6■■□□□ 1.53
CBX3-204ENST00000456948 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.6■■□□□ 1.53
CBX3-204ENST00000456948 CLDN5O00501 218 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 AP1G2O75843 785 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 TBXAS1P24557 533 aaPredicted RBP24.59■■□□□ 1.53
CBX3-204ENST00000456948 PLCB2Q00722 1185 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms