RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LCA5Q86VQ0 697 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 TREML1Q86YW5 311 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 SLC35B2Q8TB61 432 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 C7orf26Q96N11 449 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 KMT5AQ9NQR1 393 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 KCNH7Q9NS40 1196 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 STK32BQ9NY57 414 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 CNTN3Q9P232 1028 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 TMCO1Q9UM00 188 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 PHF24Q9UPV7 400 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 AGTPBP1Q9UPW5 1226 aa14.35□□□□□ -0.11
PTPRE-204ENST00000455661 RNASEH1O60930 286 aaKnown RBP14.34□□□□□ -0.11
PTPRE-204ENST00000455661 CFHP08603 1231 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 PABPC4LP0CB38 370 aaKnown RBP14.34□□□□□ -0.11
PTPRE-204ENST00000455661 TCF4P15884 667 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 SSTR3P32745 418 aaPredicted RBP14.34□□□□□ -0.11
PTPRE-204ENST00000455661 ERFP50548 548 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 RPL7AP62424 266 aaKnown RBP14.34□□□□□ -0.11
PTPRE-204ENST00000455661 MDH1BQ5I0G3 518 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 KYAT3Q6YP21 454 aaKnown RBP14.34□□□□□ -0.11
PTPRE-204ENST00000455661 TRMT1LQ7Z2T5 733 aaKnown RBP14.34□□□□□ -0.11
PTPRE-204ENST00000455661 OR6Y1Q8NGX8 325 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 CLPTM1LQ96KA5 538 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 FRMD8P1Q9BZ68 369 aaPredicted RBP14.34□□□□□ -0.11
PTPRE-204ENST00000455661 C1orf21Q9H246 121 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 EBF3Q9H4W6 596 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 ZDHHC7Q9NXF8 308 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 NDUFA13Q9P0J0 144 aa14.34□□□□□ -0.11
PTPRE-204ENST00000455661 XPO7Q9UIA9 1087 aaKnown RBP14.34□□□□□ -0.11
PTPRE-204ENST00000455661 TMEM191CA6NGB0 347 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 TMEM191BP0C7N4 346 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 CDKN2BP42772 138 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 NPTX2P47972 431 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.11
PTPRE-204ENST00000455661 TMPRSS15P98073 1019 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 FAAP100Q0VG06 881 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 XKR9Q5GH70 373 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 DCUN1D2Q6PH85 259 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 TMEM270Q6UE05 265 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 PDSS2Q86YH6 399 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 TTC13Q8NBP0 860 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 FBXO27Q8NI29 283 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 NAT14Q8WUY8 206 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 ZDHHC15Q96MV8 337 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 FAM213AQ9BRX8 229 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 KIFC3Q9BVG8 833 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 CHCHD3Q9NX63 227 aaKnown RBP14.33□□□□□ -0.11
PTPRE-204ENST00000455661 PPM1HQ9ULR3 514 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 TBC1D30Q9Y2I9 924 aa14.33□□□□□ -0.11
PTPRE-204ENST00000455661 SMCHD1A6NHR9 2005 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 USP1O94782 785 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 HLA-DRAP01903 254 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 ITGB5P18084 799 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 MAP3K10Q02779 954 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 CDK18Q07002 472 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 HIC1Q14526 733 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 DOK7Q18PE1 504 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 PABPC1LQ4VXU2 614 aaKnown RBP14.33□□□□□ -0.12
PTPRE-204ENST00000455661 RAPH1Q70E73 1250 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 SH3BP5LQ7L8J4 393 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 ARID3BQ8IVW6 561 aaPredicted RBP14.33□□□□□ -0.12
PTPRE-204ENST00000455661 PIP4K2CQ8TBX8 421 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 SLC44A1Q8WWI5 657 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 E2F7Q96AV8 911 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 RILPQ96NA2 401 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 ACAP3Q96P50 834 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 IDI2Q9BXS1 227 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 S100A14Q9HCY8 104 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 FAM198AQ9UFP1 575 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 ZNRF3Q9ULT6 936 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 SYNPO2Q9UMS6 1093 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 CHMP2BQ9UQN3 213 aa14.33□□□□□ -0.12
PTPRE-204ENST00000455661 SMIM31A0A1B0GVY4 71 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 F8VP50 259 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 BUD23O43709 281 aaKnown RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 CALB1P05937 261 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 UQCRBP14927 111 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 TNNI1P19237 187 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 HOXA10P31260 410 aaPredicted RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 RPL22P35268 128 aaKnown RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 PSMC5P62195 406 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 XIAPP98170 497 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 PIGHQ14442 188 aaPredicted RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 SH2D4BQ5SQS7 431 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 DNAJC24Q6P3W2 148 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 C15orf39Q6ZRI6 1047 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 CRLF3Q8IUI8 442 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 SP8Q8IXZ3 490 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 FAM172AQ8WUF8 416 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 CHURC1Q8WUH1 139 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 HIC2Q96JB3 615 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 SRPK1Q96SB4 655 aaKnown RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 WDR83Q9BRX9 315 aaKnown RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 TMEM150BA6NC51 233 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 ARHGAP42A6NI28 874 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 E5RJQ4 531 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 PPEF1O14829 653 aaPredicted RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 HNRNPDLO14979 420 aaKnown RBP14.32□□□□□ -0.12
PTPRE-204ENST00000455661 SPAG6O75602 509 aa14.32□□□□□ -0.12
PTPRE-204ENST00000455661 ETS2P15036 469 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms