RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 TFAMQ00059 246 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 MYO1EQ12965 1108 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 KCNB1Q14721 858 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 ZC2HC1CQ53FD0 456 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 INTS6LQ5JSJ4 861 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 DAB2IPQ5VWQ8 1189 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 LARP1BQ659C4 914 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 RNF43Q68DV7 783 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 TXNDC8Q6A555 127 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 STXBP4Q6ZWJ1 553 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 TMEM150AQ86TG1 271 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 SPATA2LQ8IUW3 424 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 BRSK2Q8IWQ3 736 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 PARP9Q8IXQ6 854 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 EFCAB13Q8IY85 973 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 SYCP3Q8IZU3 236 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 TMEM130Q8N3G9 435 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 PDCL2Q8N4E4 241 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 TOP6BLQ8N6T0 577 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 CD101Q93033 1021 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 TMX3Q96JJ7 454 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 HS3ST6Q96QI5 342 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 LSM14BQ9BX40 385 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 ECT2Q9H8V3 914 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 C2orf42Q9NWW7 574 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 GDAP2Q9NXN4 497 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 RBAKQ9NYW8 714 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 AGAP1Q9UPQ3 857 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 CCL26Q9Y258 94 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 KIAA1549LQ6ZVL6 1849 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 CHD8Q9HCK8 2581 aa8.61□□□□□ -1.03
NIF3L1-209ENST00000454952 MYO16Q9Y6X6 1858 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 SLC9A3R1O14745 358 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 TM4SF5O14894 197 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 NFATC1O95644 943 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 ITGB3P05106 788 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 TMEM191BP0C7N4 346 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 ARSAP15289 507 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 GJA4P35212 333 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 DPP6P42658 865 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 GALK1P51570 392 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 USP4Q13107 963 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 DMC1Q14565 340 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 SF3A2Q15428 464 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 SF3A1Q15459 793 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 SURF1Q15526 300 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 ZNF77Q15935 545 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 PLK5Q496M5 336 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 USP39Q53GS9 565 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 L1TD1Q5T7N2 865 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 RRAGBQ5VZM2 374 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 LMBRD2Q68DH5 695 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 TRIM68Q6AZZ1 485 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 VSTM1Q6UX27 236 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 CRELD2Q6UXH1 353 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 CCDC73Q6ZRK6 1079 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 SV2BQ7L1I2 683 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 DPH6Q7L8W6 267 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 SFR1Q86XK3 245 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 ADGRF2Q8IZF7 708 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 CSGALNACT2Q8N6G5 542 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 TSTD1Q8NFU3 115 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 RPLP0P6Q8NHW5 317 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 ZDHHC16Q969W1 377 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 ANKRD36BP1Q96IX9 119 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 HHIPQ96QV1 700 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 FAM213AQ9BRX8 229 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 TRPC7Q9HCX4 862 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 OLFML3Q9NRN5 406 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 L1RE1Q9UN81 338 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 ARHGAP26Q9UNA1 814 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 THADAQ6YHU6 1953 aa8.6□□□□□ -1.03
NIF3L1-209ENST00000454952 BCLAF3A2AJT9 711 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 OTOL1A6NHN0 477 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 TISP43B9A030 160 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 GABRDO14764 452 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 KHNYNO15037 678 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 ALDH1A2O94788 518 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 KCNK5O95279 499 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 GCNT3O95395 438 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 CAVIN2O95810 425 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 TNNC2P02585 160 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 KRT19P08727 400 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 HDCP19113 662 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 CYP2F1P24903 491 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 ANXA13P27216 316 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 ADSSP30520 456 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 GBP1P32455 592 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 PXNP49023 591 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 DGKEP52429 567 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 CREB5Q02930 508 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 PSMD2Q13200 908 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 BYSLQ13895 437 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 DDR2Q16832 855 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 EML3Q32P44 896 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 HSF5Q4G112 596 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 N4BP2L1Q5TBK1 243 aaPredicted RBP8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 PKN3Q6P5Z2 889 aa8.59□□□□□ -1.03
NIF3L1-209ENST00000454952 DYMQ7RTS9 669 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms