RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
CHEK2-220ENST00000454252 HSFX1Q9UBD0 423 aa7.56□□□□□ -1.2
CHEK2-220ENST00000454252 MBD1Q9UIS9 605 aaPredicted RBP7.56□□□□□ -1.2
CHEK2-220ENST00000454252 GTF3C4Q9UKN8 822 aa7.56□□□□□ -1.2
CHEK2-220ENST00000454252 PCDHB5Q9Y5E4 795 aa7.56□□□□□ -1.2
CHEK2-220ENST00000454252 DSPP15924 2871 aaKnown RBP7.56□□□□□ -1.2
CHEK2-220ENST00000454252 FAM208BQ5VWN6 2430 aa7.56□□□□□ -1.2
CHEK2-220ENST00000454252 NBEAQ8NFP9 2946 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 KPNA7A9QM74 516 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 TAF4O00268 1085 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 KHNYNO15037 678 aaKnown RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 XPOTO43592 962 aaKnown RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 TRAK2O60296 914 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 NOL4O94818 638 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 FAM13AO94988 1023 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 ITGB3P05106 788 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 PDIA4P13667 645 aaKnown RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 PLCG1P19174 1290 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 DDX6P26196 483 aaKnown RBP eCLIP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 IFNAR2P48551 515 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 ZNF131P52739 623 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 TFAMQ00059 246 aaKnown RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 FAM160A1Q05DH4 1040 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 KDSRQ06136 332 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 PDGFRLQ15198 375 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 PTPAQ15257 358 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 TRIM61Q5EBN2 209 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 DAB2IPQ5VWQ8 1189 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 RASSF3Q86WH2 238 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 SCN4BQ8IWT1 228 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 DCP1BQ8IZD4 617 aaKnown RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 THEM5Q8N1Q8 247 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 C1orf127Q8N9H9 656 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 CXorf38Q8TB03 319 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 USP28Q96RU2 1077 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 ZSCAN16Q9H4T2 348 aaPredicted RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 KIF9Q9HAQ2 790 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 PARVGQ9HBI0 331 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 SMPD4Q9NXE4 827 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 DDX43Q9NXZ2 648 aaKnown RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 TBC1D7Q9P0N9 293 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 GCNT4Q9P109 453 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 LARSQ9P2J5 1176 aaKnown RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 AGO2Q9UKV8 859 aaKnown RBP7.55□□□□□ -1.2
CHEK2-220ENST00000454252 DSEQ9UL01 958 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 AGAP1Q9UPQ3 857 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 C2CD2Q9Y426 696 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 CLIC4Q9Y696 253 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 STK24Q9Y6E0 443 aa7.55□□□□□ -1.2
CHEK2-220ENST00000454252 ITPR1Q14643 2758 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 ANKRD11Q6UB99 2663 aaPredicted RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 TRAV19A0A0A6YYK7 116 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 GOLGA8IPA6NC78 632 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 GOLGA8JA6NMD2 632 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 SGK1O00141 431 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 LEFTY2O00292 366 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 LAD1O00515 517 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 ADAM23O75077 832 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 KLF8O95600 359 aaPredicted RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CYP17A1P05093 508 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 KRT18P05783 430 aaKnown RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CSH1P0DML2 217 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CSH2P0DML3 217 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CEACAM1P13688 526 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 ENGP17813 658 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 LMO2P25791 158 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 TIE1P35590 1138 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CASP5P51878 434 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CACNA2D1P54289 1103 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 GTF2BQ00403 316 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 TSPY1Q01534 308 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 ZNF268Q14587 947 aaPredicted RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CRY1Q16526 586 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 FBXO43Q4G163 708 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 USP39Q53GS9 565 aaKnown RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 INTS6LQ5JSJ4 861 aaKnown RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CLEC17AQ6ZS10 378 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 USP49Q70CQ1 688 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 BRAPQ7Z569 592 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 FILIP1Q7Z7B0 1213 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 SFR1Q86XK3 245 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CD302Q8IX05 232 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 TXNDC5Q8NBS9 432 aaKnown RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 NOC3LQ8WTT2 800 aaKnown RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 C2orf15Q8WU43 125 aaKnown RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 HMGB4Q8WW32 186 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 RAD54LQ92698 747 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 ATP2A3Q93084 1043 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 MYLPFQ96A32 169 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 ACDQ96AP0 544 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CNOT6LQ96LI5 555 aaKnown RBP7.54□□□□□ -1.2
CHEK2-220ENST00000454252 FAM213AQ9BRX8 229 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 MTMR12Q9C0I1 747 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 CCSER1Q9C0I3 900 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 GDPD2Q9HCC8 539 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 SIX4Q9UIU6 781 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 ODF2LQ9ULJ1 636 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 LHX6Q9UPM6 363 aa7.54□□□□□ -1.2
CHEK2-220ENST00000454252 DERAQ9Y315 318 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms