RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 RAET1EQ8TD07 263 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 PPP2R3CQ969Q6 453 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 ZNF669Q96BR6 464 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 RHBDL2Q9NX52 303 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 ATP11BQ9Y2G3 1177 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 DGKIO75912 1065 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 ALBP02768 609 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 C6orf222P0C671 652 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 GRK2P25098 689 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 SERPINB1P30740 379 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 ACADSBP45954 432 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 PREPLQ4J6C6 727 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 MREGQ8N565 214 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 SH3TC2Q8TF17 1288 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 USP6NLQ92738 828 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-207ENST00000453963 TSC22D4Q9Y3Q8 395 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 SNX9Q9Y5X1 595 aa12.51□□□□□ -0.41
SEC16A-207ENST00000453963 CNTFP26441 200 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 AQP5P55064 265 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 TJP2Q9UDY2 1190 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 SCAF8Q9UPN6 1271 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 PIN4Q9Y237 131 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 ADGRA3Q8IWK6 1321 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 EEF2KO00418 725 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 MAGEB2O15479 319 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 TLR2O60603 784 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 DDX5P17844 614 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 KLRK1P26718 216 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 ELF3P78545 371 aaPredicted RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 PDAP1Q13442 181 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 ANO4Q32M45 955 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 ACCSLQ4AC99 568 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 TTMPQ5BVD1 217 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 PLA2G4FQ68DD2 849 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 IRGCQ6NXR0 463 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 XRRA1Q6P2D8 792 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 CRELD2Q6UXH1 353 aaPredicted RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 BNC2Q6ZN30 1099 aaPredicted RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 ZNF662Q6ZS27 426 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 ANKRD13AQ8IZ07 590 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 SNRNP27Q8WVK2 155 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 FAR2Q96K12 515 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 DDX50Q9BQ39 737 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 CASS4Q9NQ75 786 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 SCN3BQ9NY72 215 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 KCNH4Q9UQ05 1017 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 CCDC159P0C7I6 412 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 ZNF157P51786 506 aaPredicted RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 TMEM132DQ14C87 1099 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 ZC3H12BQ5HYM0 836 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 NAPEPLDQ6IQ20 393 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 EFHBQ8N7U6 833 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 STK32AQ8WU08 396 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 SH3KBP1Q96B97 665 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 BTBD10Q9BSF8 475 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 SHOC2Q9UQ13 582 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 PCDHGC5Q9Y5F6 944 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 FAM205AQ6ZU69 1335 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 IQGAP1P46940 1657 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 POLRMTO00411 1230 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 GH1P01241 217 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 TFRCP02786 760 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 PTGER2P43116 358 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 TRIM16LQ309B1 348 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 RRM2BQ7LG56 351 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 TATDN2Q93075 761 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 ATG4CQ96DT6 458 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 SHCBP1LQ9BZQ2 653 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 SAR1AQ9NR31 198 aa12.5□□□□□ -0.41
SEC16A-207ENST00000453963 METTL5Q9NRN9 209 aaKnown RBP12.5□□□□□ -0.41
SEC16A-207ENST00000453963 KCNK10P57789 538 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 COBLL1Q53SF7 1204 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 TERB1Q8NA31 727 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 GTF3C2Q8WUA4 911 aaPredicted RBP12.49□□□□□ -0.41
SEC16A-207ENST00000453963 ZNF518BQ9C0D4 1074 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 EHD4Q9H223 541 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■□□□□ 9.2
SEC16A-207ENST00000453963 MAP3K20Q9NYL2 800 aaKnown RBP12.49□□□□□ -0.41
SEC16A-207ENST00000453963 SLC39A10Q9ULF5 831 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 ZBTB39O15060 712 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 RPL21P46778 160 aaKnown RBP12.49□□□□□ -0.41
SEC16A-207ENST00000453963 PRKCEQ02156 737 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 THEMIS2Q5TEJ8 643 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 ZNF786Q8N393 782 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 TMC2Q8TDI7 906 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 KCNH7Q9NS40 1196 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 RRM1P23921 792 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 CLK1P49759 484 aaKnown RBP12.49□□□□□ -0.41
SEC16A-207ENST00000453963 ALDH5A1P51649 535 aaPredicted RBP12.49□□□□□ -0.41
SEC16A-207ENST00000453963 IFI35P80217 286 aaPredicted RBP12.49□□□□□ -0.41
SEC16A-207ENST00000453963 DMC1Q14565 340 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 NT5DC3Q86UY8 548 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 ATPAF2Q8N5M1 289 aa12.49□□□□□ -0.41
SEC16A-207ENST00000453963 CHST13Q8NET6 341 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms