RNA–Protein interactions for RNA: ENST00000453944.1

DDX59-208, Transcript of DEAD-box helicase 59, human

TSL 3

Gene DDX59, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX59-208	ENST00000453944	RIC8A	Q9NPQ8	531 aa		4.58	□□□□□ -1.68
DDX59-208	ENST00000453944	PPP4R1L	Q9P1A2	415 aa		4.58	□□□□□ -1.68
DDX59-208	ENST00000453944	KIF17	Q9P2E2	1029 aa		4.58	□□□□□ -1.68
DDX59-208	ENST00000453944	PDP2	Q9P2J9	529 aa		4.58	□□□□□ -1.68
DDX59-208	ENST00000453944	HERC5	Q9UII4	1024 aa	Known RBP	4.58	□□□□□ -1.68
DDX59-208	ENST00000453944	SHOC2	Q9UQ13	582 aa		4.58	□□□□□ -1.68
DDX59-208	ENST00000453944	ZNF536	O15090	1300 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944		A0A1B0GTW7	788 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	CCDC195	A0A1B0GUA6	201 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944		J3KRW8	73 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	AGPS	O00116	658 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	PCDH17	O14917	1159 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	EPB41L2	O43491	1005 aa	Known RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	LAMTOR5	O43504	91 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	SRGAP2	O75044	1071 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	ACTL6B	O94805	426 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	IPO13	O94829	963 aa	Known RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	RHOBTB3	O94955	611 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	ZFPL1	O95159	310 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	NTSR2	O95665	410 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	ITGA2B	P08514	1039 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	ATXN1L	P0C7T5	689 aa	Known RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	AR	P10275	920 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	FGFR4	P22455	802 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	MST1	P26927	711 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	RABGGTB	P53611	331 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	PRKAG1	P54619	331 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	BCAT1	P54687	386 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	SP2	Q02086	613 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	FOXD4	Q12950	439 aa	Predicted RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	TBX2	Q13207	712 aa	Predicted RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	CNGB1	Q14028	1251 aa	Predicted RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	GRM4	Q14833	912 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	FAM110C	Q1W6H9	321 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	CD300E	Q496F6	205 aa	Predicted RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	MRNIP	Q6NTE8	343 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	USP17L6P	Q6QN14	398 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	LIMS2	Q7Z4I7	341 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	MAATS1	Q7Z4T9	603 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	PLEKHH3	Q7Z736	793 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	SGMS1	Q86VZ5	419 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	CPO	Q8IVL8	374 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	HERC6	Q8IVU3	1022 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	SP8	Q8IXZ3	490 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	CPT1C	Q8TCG5	803 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	AFG1L	Q8WV93	481 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	USP13	Q92995	863 aa	Predicted RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	MPHOSPH9	Q99550	1183 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	MNT	Q99583	582 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	SLC25A32	Q9H2D1	315 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	ZHX3	Q9H4I2	956 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	FEM1B	Q9UK73	627 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	FBXO9	Q9UK97	447 aa	Predicted RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	NDRG4	Q9ULP0	352 aa	Known RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	ZFR2	Q9UPR6	939 aa	Known RBP	4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	CLCA2	Q9UQC9	943 aa		4.57	□□□□□ -1.68
DDX59-208	ENST00000453944	NPEPPSL1	A6NEC2	478 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	AQP7P3	A6NL99	342 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	ADM5	C9JUS6	153 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	TOR1B	O14657	336 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	RAD17	O75943	681 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	FAM155B	O75949	473 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	ERBB2	P04626	1255 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	CENPB	P07199	599 aa	Predicted RBP	4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	ANXA6	P08133	673 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	ELANE	P08246	267 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	BDNF	P23560	247 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	ADORA2A	P29274	412 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	LRPAP1	P30533	357 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	CNR2	P34972	360 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	ADD2	P35612	726 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	OCA2	Q04671	838 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	DDX10	Q13206	875 aa	Known RBP	4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	LY6K	Q17RY6	165 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	PDCD4	Q53EL6	469 aa	Known RBP	4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	METTL24	Q5JXM2	366 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	FBXO47	Q5MNV8	452 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	ARHGAP40	Q5TG30	622 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	VPS53	Q5VIR6	699 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	MCTP1	Q6DN14	999 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944		Q6ZRM9	215 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	HEATR4	Q86WZ0	1026 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	GATAD2A	Q86YP4	633 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	TMTC1	Q8IUR5	882 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	RASGRP3	Q8IV61	690 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	PPHLN1	Q8NEY8	458 aa	Known RBP	4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	FEZF2	Q8TBJ5	459 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	SKA1	Q96BD8	255 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	MIEF2	Q96C03	454 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	MAEL	Q96JY0	434 aa	Known RBP	4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	FAM227B	Q96M60	508 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	MED15	Q96RN5	788 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	GPR20	Q99678	358 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	PTDSS2	Q9BVG9	487 aa		4.56	□□□□□ -1.68
DDX59-208	ENST00000453944	REXO4	Q9GZR2	422 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms