RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CRIPAKQ8N1N5 446 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 OR6B3Q8NGW1 331 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 SLC20A1Q8WUM9 679 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 BADQ92934 168 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 VWCEQ96DN2 955 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 SENP8Q96LD8 212 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 NT5C1AQ9BXI3 368 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 DONSONQ9NYP3 566 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 CACNG4Q9UBN1 327 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 CCDC188H7C350 402 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 MED7O43513 233 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 FGBP02675 491 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 MYZAPP0CAP1 466 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 ODC1P11926 461 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 CD19P15391 556 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 NDST1P52848 882 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 WDR5P61964 334 aaKnown RBP16.74■□□□□ 0.27
SNX17-204ENST00000453453 SOWAHAQ2M3V2 549 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 ALKBH5Q6P6C2 394 aaKnown RBP16.74■□□□□ 0.27
SNX17-204ENST00000453453 TRIM72Q6ZMU5 477 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 CCDC121Q6ZUS5 278 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 ZNF280BQ86YH2 543 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 ADGRF2Q8IZF7 708 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 TMEM86AQ8N2M4 240 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 SH2D3CQ8N5H7 860 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 TMEM176AQ96HP8 235 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 MRPL45Q9BRJ2 306 aaKnown RBP16.74■□□□□ 0.27
SNX17-204ENST00000453453 SYT11Q9BT88 431 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 KLC4Q9NSK0 619 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 KIAA1257Q9ULG3 409 aa16.74■□□□□ 0.27
SNX17-204ENST00000453453 GMNCA6NCL1 334 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 ZBBXA8MT70 800 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 TMEM189-UBE2V1I3L0A0 370 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 DDX3XO00571 662 aaKnown RBP eCLIP16.73■□□□□ 0.271e-10■■■□□ 17.5
SNX17-204ENST00000453453 NCK2O43639 380 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 DDHD2O94830 711 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 KRT14P02533 472 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 GATMP50440 423 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 ATP1A2P50993 1020 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 RAD23BP54727 409 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 METTL23Q86XA0 190 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 LNX1Q8TBB1 728 aaPredicted RBP16.73■□□□□ 0.27
SNX17-204ENST00000453453 SPATA18Q8TC71 538 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 ACTRT1Q8TDG2 376 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 TOP1MTQ969P6 601 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 CYFIP2Q96F07 1278 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 LBHD1Q9BQE6 289 aaPredicted RBP16.73■□□□□ 0.27
SNX17-204ENST00000453453 PAAF1Q9BRP4 392 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 TMEM175Q9BSA9 504 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 COLEC11Q9BWP8 271 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 ACP6Q9NPH0 428 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 SALL4Q9UJQ4 1053 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 NAGPAQ9UK23 515 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 DSEQ9UL01 958 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 PLAAQ9Y263 795 aa16.73■□□□□ 0.27
SNX17-204ENST00000453453 A8MXQ7 604 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 TRAPPC3O43617 180 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 MMEP08473 750 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 CHRNB2P17787 502 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 WARSP23381 471 aaKnown RBP16.72■□□□□ 0.27
SNX17-204ENST00000453453 GNL1P36915 607 aaPredicted RBP16.72■□□□□ 0.27
SNX17-204ENST00000453453 FMO1Q01740 532 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 GUCY1A3Q02108 690 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 PPP1R2P3Q6NXS1 205 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 OTOP2Q7RTS6 562 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 LIMS2Q7Z4I7 341 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 CCDC13Q8IYE1 715 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 C3orf58Q8NDZ4 430 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 SLC30A5Q8TAD4 765 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 DPF3Q92784 378 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 CENPTQ96BT3 561 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 HEXIM2Q96MH2 286 aaKnown RBP16.72■□□□□ 0.27
SNX17-204ENST00000453453 CNOT10Q9H9A5 744 aaKnown RBP16.72■□□□□ 0.27
SNX17-204ENST00000453453 SLC12A6Q9UHW9 1150 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 MCM8Q9UJA3 840 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 CEP83Q9Y592 693 aa16.72■□□□□ 0.27
SNX17-204ENST00000453453 CCDC85CA6NKD9 419 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 MYO1FO00160 1098 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 PALMO75781 387 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 DGKIO75912 1065 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 KIF4AO95239 1232 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 ALDH2P05091 517 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 FAM153BP0C7A2 387 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 VDRP11473 427 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 CXCR5P32302 372 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 LHX1P48742 406 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 STILQ15468 1287 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 FAM153CQ494X1 144 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 PAN2Q504Q3 1202 aaKnown RBP16.71■□□□□ 0.27
SNX17-204ENST00000453453 TIGD5Q53EQ6 642 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 SGO2Q562F6 1265 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 CEP85LQ5SZL2 805 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 TNS4Q8IZW8 715 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 SLC4A11Q8NBS3 891 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 ZNF606Q8WXB4 792 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 DDX1Q92499 740 aaKnown RBP16.71■□□□□ 0.27
SNX17-204ENST00000453453 TNIP3Q96KP6 325 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 KRT12Q99456 494 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 ELOVL4Q9GZR5 314 aa16.71■□□□□ 0.27
SNX17-204ENST00000453453 MTIF3Q9H2K0 278 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms